Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ST13P21-201ENST00000453250 1098 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 BX323845.2-201ENST00000458382 234 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 RN7SL518P-201ENST00000491887 280 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 RPL10P7-201ENST00000495649 625 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC100854.1-201ENST00000520351 341 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC027506.1-201ENST00000621395 198 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC004943.1-203ENST00000624370 1074 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 RPSAP68-201ENST00000625020 438 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 CASC19-232ENST00000641480 1244 ntBASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
C9orf40Q8IXQ3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 HCG18-244ENST00000602516 2890 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 RNU6-1017P-201ENST00000363613 106 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 RNA5SP442-201ENST00000365050 107 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 MIR138-2-201ENST00000384916 84 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL139100.1-201ENST00000408001 498 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL645936.2-201ENST00000430565 928 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL604028.2-201ENST00000437848 788 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 SDHCP3-201ENST00000445371 506 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 SCARNA6-201ENST00000515982 265 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC079866.1-201ENST00000534985 1220 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 SLC25A51P2-201ENST00000535708 889 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC126323.4-201ENST00000566935 234 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC091932.1-201ENST00000569381 427 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 MIR3159-201ENST00000584572 74 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC117503.3-201ENST00000623811 601 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC008626.2-201ENST00000624425 248 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 CTAGE11P-201ENST00000451540 2353 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 AC132219.2-201ENST00000624416 2327 ntBASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
C9orf40Q8IXQ3 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC005614.1-201ENST00000598952 3653 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 U3.48-201ENST00000363172 216 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms