RNA–Protein interactions for RNA: ENST00000363172.2

U3.48-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.48-201ENST00000363172 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
U3.48-201ENST00000363172 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
U3.48-201ENST00000363172 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
U3.48-201ENST00000363172 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
U3.48-201ENST00000363172 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
U3.48-201ENST00000363172 FOXD1Q16676 465 aa21.54■■□□□ 1.04
U3.48-201ENST00000363172 ADRA2BP18089 450 aa20.86■□□□□ 0.93
U3.48-201ENST00000363172 PPP6R1Q9UPN7 881 aa20.81■□□□□ 0.92
U3.48-201ENST00000363172 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
U3.48-201ENST00000363172 MSH5O43196 834 aa19.92■□□□□ 0.78
U3.48-201ENST00000363172 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
U3.48-201ENST00000363172 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
U3.48-201ENST00000363172 KCNA4P22459 653 aa19.08■□□□□ 0.64
U3.48-201ENST00000363172 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
U3.48-201ENST00000363172 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
U3.48-201ENST00000363172 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
U3.48-201ENST00000363172 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
U3.48-201ENST00000363172 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
U3.48-201ENST00000363172 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
U3.48-201ENST00000363172 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
U3.48-201ENST00000363172 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
U3.48-201ENST00000363172 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
U3.48-201ENST00000363172 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
U3.48-201ENST00000363172 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
U3.48-201ENST00000363172 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
U3.48-201ENST00000363172 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
U3.48-201ENST00000363172 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
U3.48-201ENST00000363172 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
U3.48-201ENST00000363172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
U3.48-201ENST00000363172 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
U3.48-201ENST00000363172 ZBTB22O15209 634 aa17.48■□□□□ 0.39
U3.48-201ENST00000363172 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
U3.48-201ENST00000363172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
U3.48-201ENST00000363172 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
U3.48-201ENST00000363172 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
U3.48-201ENST00000363172 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
U3.48-201ENST00000363172 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
U3.48-201ENST00000363172 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
U3.48-201ENST00000363172 APLP2Q06481 763 aa16.96■□□□□ 0.31
U3.48-201ENST00000363172 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
U3.48-201ENST00000363172 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
U3.48-201ENST00000363172 CAPN15O75808 1086 aa16.64■□□□□ 0.25
U3.48-201ENST00000363172 ABCC9O60706 1549 aa16.63■□□□□ 0.25
U3.48-201ENST00000363172 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
U3.48-201ENST00000363172 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
U3.48-201ENST00000363172 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
U3.48-201ENST00000363172 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
U3.48-201ENST00000363172 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
U3.48-201ENST00000363172 POLA2Q14181 598 aa16.33■□□□□ 0.2
U3.48-201ENST00000363172 ABCB7O75027 752 aa16.28■□□□□ 0.2
U3.48-201ENST00000363172 DSG3P32926 999 aa16.23■□□□□ 0.19
U3.48-201ENST00000363172 FBLN2P98095 1184 aa16.16■□□□□ 0.18
U3.48-201ENST00000363172 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
U3.48-201ENST00000363172 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
U3.48-201ENST00000363172 FKBP8Q14318 412 aa15.95■□□□□ 0.14
U3.48-201ENST00000363172 SPDYE4A6NLX3 237 aa15.8■□□□□ 0.12
U3.48-201ENST00000363172 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
U3.48-201ENST00000363172 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
U3.48-201ENST00000363172 SPDYE2BA6NHP3 402 aa15.68■□□□□ 0.1
U3.48-201ENST00000363172 SPDYE6P0CI01 402 aa15.68■□□□□ 0.1
U3.48-201ENST00000363172 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
U3.48-201ENST00000363172 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
U3.48-201ENST00000363172 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
U3.48-201ENST00000363172 NACADO15069 1562 aa15.55■□□□□ 0.08
U3.48-201ENST00000363172 SSUH2Q9Y2M2 353 aa15.5■□□□□ 0.07
U3.48-201ENST00000363172 PROM2Q8N271 834 aa15.46■□□□□ 0.07
U3.48-201ENST00000363172 FBXO3Q9UK99 471 aa15.44■□□□□ 0.06
U3.48-201ENST00000363172 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
U3.48-201ENST00000363172 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
U3.48-201ENST00000363172 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
U3.48-201ENST00000363172 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
U3.48-201ENST00000363172 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
U3.48-201ENST00000363172 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
U3.48-201ENST00000363172 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
U3.48-201ENST00000363172 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
U3.48-201ENST00000363172 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
U3.48-201ENST00000363172 VASPP50552 380 aaPredicted RBP15.13■□□□□ 0.01
U3.48-201ENST00000363172 CLEC11AQ9Y240 323 aa15.13■□□□□ 0.01
U3.48-201ENST00000363172 SHROOM4Q9ULL8 1493 aa15.05■□□□□ -0
U3.48-201ENST00000363172 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
U3.48-201ENST00000363172 PLEKHG5O94827 1062 aa15.03■□□□□ -0
U3.48-201ENST00000363172 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
U3.48-201ENST00000363172 PRR29P0C7W0 189 aa15.02■□□□□ -0
U3.48-201ENST00000363172 MIER1Q8N108 512 aa15.02■□□□□ -0
U3.48-201ENST00000363172 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
U3.48-201ENST00000363172 PITPNM1O00562 1244 aa15□□□□□ -0.01
U3.48-201ENST00000363172 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
U3.48-201ENST00000363172 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
U3.48-201ENST00000363172 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
U3.48-201ENST00000363172 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
U3.48-201ENST00000363172 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
U3.48-201ENST00000363172 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
U3.48-201ENST00000363172 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
U3.48-201ENST00000363172 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
U3.48-201ENST00000363172 CHRDL2Q6WN34 429 aa14.81□□□□□ -0.04
U3.48-201ENST00000363172 SPOCK2Q92563 424 aa14.77□□□□□ -0.05
U3.48-201ENST00000363172 CREBZFQ9NS37 354 aa14.76□□□□□ -0.05
U3.48-201ENST00000363172 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
U3.48-201ENST00000363172 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
U3.48-201ENST00000363172 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms