Protein–RNA interactions for Protein: Q9Y512

SAMM50, Sorting and assembly machinery component 50 homolog, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50Q9Y512 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SAMM50Q9Y512 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 AC120498.8-201ENST00000614275 531 ntBASIC22.56■■□□□ 1.2
SAMM50Q9Y512 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SAMM50Q9Y512 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 HLA-G-202ENST00000376815 851 ntBASIC22.55■■□□□ 1.2
SAMM50Q9Y512 HLA-G-203ENST00000376818 1127 ntBASIC22.55■■□□□ 1.2
SAMM50Q9Y512 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SAMM50Q9Y512 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 AC233263.1-201ENST00000578059 224 ntBASIC22.54■■□□□ 1.2
SAMM50Q9Y512 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 AC069544.1-201ENST00000609399 999 ntBASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SAMM50Q9Y512 PTBP1P-201ENST00000554374 1601 ntBASIC22.53■■□□□ 1.2
SAMM50Q9Y512 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 AL158047.1-201ENST00000445918 881 ntBASIC22.53■■□□□ 1.2
SAMM50Q9Y512 AC098590.1-201ENST00000468126 897 ntBASIC22.53■■□□□ 1.2
SAMM50Q9Y512 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 AC142381.4-202ENST00000563973 229 ntBASIC22.53■■□□□ 1.2
SAMM50Q9Y512 KRT8P20-201ENST00000423953 1409 ntBASIC22.53■■□□□ 1.2
SAMM50Q9Y512 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SAMM50Q9Y512 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SAMM50Q9Y512 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SAMM50Q9Y512 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SAMM50Q9Y512 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms