Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERGIC3Q9Y282 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AP000997.3-201ENST00000623333 2250 ntBASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AC133561.4-201ENST00000566112 224 ntBASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AL138781.2-201ENST00000617896 1843 ntBASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.18■□□□□ 0.5
ERGIC3Q9Y282 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 AL512631.2-201ENST00000604634 923 ntBASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 AL035685.1-201ENST00000636663 812 ntBASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 AC079598.2-202ENST00000546624 1451 ntBASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ERGIC3Q9Y282 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 AC061975.6-201ENST00000579045 1553 ntBASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.16■□□□□ 0.5
ERGIC3Q9Y282 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ERGIC3Q9Y282 AC053503.5-201ENST00000601508 636 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms