Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.19■□□□□ 0.82
HACD3Q9P035 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.19■□□□□ 0.82
HACD3Q9P035 AL512408.1-201ENST00000569378 2000 ntBASIC20.19■□□□□ 0.82
HACD3Q9P035 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
HACD3Q9P035 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.18■□□□□ 0.82
HACD3Q9P035 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HACD3Q9P035 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HACD3Q9P035 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HACD3Q9P035 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.18■□□□□ 0.82
HACD3Q9P035 PTBP1P-201ENST00000554374 1601 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.18■□□□□ 0.82
HACD3Q9P035 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.18■□□□□ 0.82
HACD3Q9P035 AC097658.1-201ENST00000475555 843 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 AC023632.3-201ENST00000521633 145 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HACD3Q9P035 AL138781.1-201ENST00000566567 1274 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
HACD3Q9P035 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.18■□□□□ 0.82
HACD3Q9P035 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HACD3Q9P035 SMG8-203ENST00000578922 2178 ntBASIC20.18■□□□□ 0.82
HACD3Q9P035 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.18■□□□□ 0.82
HACD3Q9P035 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HACD3Q9P035 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 HLA-L-209ENST00000420110 1011 ntBASIC20.17■□□□□ 0.82
HACD3Q9P035 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.17■□□□□ 0.82
HACD3Q9P035 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.17■□□□□ 0.82
HACD3Q9P035 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.17■□□□□ 0.82
HACD3Q9P035 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.17■□□□□ 0.82
HACD3Q9P035 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HACD3Q9P035 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.17■□□□□ 0.82
HACD3Q9P035 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HACD3Q9P035 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.16■□□□□ 0.82
HACD3Q9P035 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
HACD3Q9P035 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
HACD3Q9P035 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HACD3Q9P035 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.16■□□□□ 0.82
HACD3Q9P035 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HACD3Q9P035 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.16■□□□□ 0.82
HACD3Q9P035 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.16■□□□□ 0.82
HACD3Q9P035 AC069152.1-201ENST00000438030 544 ntBASIC20.16■□□□□ 0.82
HACD3Q9P035 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.16■□□□□ 0.82
HACD3Q9P035 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.16■□□□□ 0.82
HACD3Q9P035 AL031963.3-201ENST00000606441 850 ntBASIC20.16■□□□□ 0.82
HACD3Q9P035 MYC-209ENST00000641252 345 ntBASIC20.16■□□□□ 0.82
HACD3Q9P035 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.16■□□□□ 0.82
HACD3Q9P035 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HACD3Q9P035 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HACD3Q9P035 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HACD3Q9P035 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.15■□□□□ 0.82
HACD3Q9P035 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HACD3Q9P035 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HACD3Q9P035 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HACD3Q9P035 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
HACD3Q9P035 HLA-G-202ENST00000376815 851 ntBASIC20.15■□□□□ 0.82
HACD3Q9P035 HLA-G-203ENST00000376818 1127 ntBASIC20.15■□□□□ 0.82
HACD3Q9P035 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HACD3Q9P035 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
HACD3Q9P035 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.15■□□□□ 0.82
HACD3Q9P035 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.15■□□□□ 0.82
HACD3Q9P035 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
HACD3Q9P035 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.15■□□□□ 0.82
HACD3Q9P035 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms