Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 TREX1-205ENST00000625293 1783 ntBASIC24.46■■□□□ 1.51
UPF2Q9HAU5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
UPF2Q9HAU5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
UPF2Q9HAU5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.51
UPF2Q9HAU5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.45■■□□□ 1.51
UPF2Q9HAU5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.45■■□□□ 1.51
UPF2Q9HAU5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.45■■□□□ 1.5
UPF2Q9HAU5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 AC008406.3-201ENST00000620001 1374 ntBASIC24.44■■□□□ 1.5
UPF2Q9HAU5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 SLC7A5P2-201ENST00000553010 536 ntBASIC24.44■■□□□ 1.5
UPF2Q9HAU5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 AC004408.2-201ENST00000623613 2777 ntBASIC24.44■■□□□ 1.5
UPF2Q9HAU5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.44■■□□□ 1.5
UPF2Q9HAU5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 AC131212.1-201ENST00000613771 668 ntBASIC24.43■■□□□ 1.5
UPF2Q9HAU5 AL136967.2-201ENST00000623968 743 ntBASIC24.43■■□□□ 1.5
UPF2Q9HAU5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
UPF2Q9HAU5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 IRS3P-201ENST00000223076 1006 ntBASIC24.42■■□□□ 1.5
UPF2Q9HAU5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 AC105265.2-201ENST00000467189 838 ntBASIC24.42■■□□□ 1.5
UPF2Q9HAU5 MIR6084-201ENST00000622012 110 ntBASIC24.42■■□□□ 1.5
UPF2Q9HAU5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
UPF2Q9HAU5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 CCDC92B-201ENST00000575506 885 ntBASIC24.41■■□□□ 1.5
UPF2Q9HAU5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.41■■□□□ 1.5
UPF2Q9HAU5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms