Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TM2D3Q9BRN9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 AC121338.2-201ENST00000622535 1744 ntBASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 CYP2D8P-201ENST00000433633 1490 ntBASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TM2D3Q9BRN9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 TERF1P1-201ENST00000311003 1181 ntBASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 AL390955.1-201ENST00000428694 934 ntBASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 AL137013.1-201ENST00000432946 1228 ntBASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 AC010947.1-201ENST00000623454 693 ntBASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TM2D3Q9BRN9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 KRT18P57-201ENST00000443599 1254 ntBASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 SLC25A3P1-201ENST00000443844 931 ntBASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 AL031985.4-201ENST00000642138 673 ntBASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 Z98882.1-201ENST00000622160 2253 ntBASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 AC073508.3-201ENST00000619697 1419 ntBASIC14.41□□□□□ -0.1
TM2D3Q9BRN9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.4□□□□□ -0.1
TM2D3Q9BRN9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms