Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 AC110285.5-201ENST00000611501 352 ntBASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 AC020907.5-201ENST00000624372 1936 ntBASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDK5RAP1Q96SZ6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK5RAP1Q96SZ6 AL137060.1-201ENST00000618151 2648 ntBASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 AC124283.5-201ENST00000624661 1809 ntBASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 KRASP1-201ENST00000407852 552 ntBASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
CDK5RAP1Q96SZ6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP1Q96SZ6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 MIR718-201ENST00000390190 70 ntBASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 AC093827.2-201ENST00000512654 315 ntBASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP1Q96SZ6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms