Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEDD4LQ96PU5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NEDD4LQ96PU5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NEDD4LQ96PU5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 AC099791.1-201ENST00000416440 715 ntBASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 TSPY26P-201ENST00000476365 1326 ntBASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 BX005040.4-201ENST00000637145 1518 ntBASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NEDD4LQ96PU5 HCG11-201ENST00000411553 5696 ntBASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 AC027682.1-201ENST00000562846 899 ntBASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NEDD4LQ96PU5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NEDD4LQ96PU5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.58■□□□□ 0.4
NEDD4LQ96PU5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NEDD4LQ96PU5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.58■□□□□ 0.4
NEDD4LQ96PU5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.58■□□□□ 0.4
NEDD4LQ96PU5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms