Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.63■□□□□ 0.41
TMEM54Q969K7 TMEM179-206ENST00000616017 1645 ntBASIC17.63■□□□□ 0.41
TMEM54Q969K7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 AL390719.1-204ENST00000412397 1219 ntBASIC17.63■□□□□ 0.41
TMEM54Q969K7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 HLA-B-256ENST00000639848 1089 ntBASIC17.63■□□□□ 0.41
TMEM54Q969K7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM54Q969K7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM54Q969K7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 AL355802.2-201ENST00000402069 882 ntBASIC17.62■□□□□ 0.41
TMEM54Q969K7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM54Q969K7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.62■□□□□ 0.41
TMEM54Q969K7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM54Q969K7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM54Q969K7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM54Q969K7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 AC060766.5-201ENST00000590539 871 ntBASIC17.6■□□□□ 0.41
TMEM54Q969K7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 AC092368.3-202ENST00000574180 1591 ntBASIC17.6■□□□□ 0.41
TMEM54Q969K7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM54Q969K7 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.6■□□□□ 0.41
TMEM54Q969K7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEM54Q969K7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms