Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.93■□□□□ 0.46
PTP4A1Q93096 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTP4A1Q93096 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 AC016769.1-201ENST00000409132 1010 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 PGM5P4-201ENST00000421970 445 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 TERF1P5-201ENST00000477545 1207 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 AL591742.1-201ENST00000604433 565 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 MYCNOS-205ENST00000641950 531 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTP4A1Q93096 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 AC026471.1-201ENST00000564629 3026 ntBASIC17.92■□□□□ 0.46
PTP4A1Q93096 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.92■□□□□ 0.46
PTP4A1Q93096 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.91■□□□□ 0.46
PTP4A1Q93096 CYP21A1P-202ENST00000354927 1481 ntBASIC17.91■□□□□ 0.46
PTP4A1Q93096 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTP4A1Q93096 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTP4A1Q93096 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 AC022517.1-201ENST00000592429 346 ntBASIC17.9■□□□□ 0.46
PTP4A1Q93096 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 AP000974.1-201ENST00000623909 2387 ntBASIC17.9■□□□□ 0.46
PTP4A1Q93096 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
PTP4A1Q93096 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTP4A1Q93096 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTP4A1Q93096 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTP4A1Q93096 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.89■□□□□ 0.45
PTP4A1Q93096 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms