Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LINC01960-201ENST00000563759 1884 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AL353801.3-201ENST00000609898 542 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC243591.1-201ENST00000452967 1364 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC008040.2-201ENST00000461049 708 ntBASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SYNE2Q8WXH0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AC190387.1-201ENST00000551683 408 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AL353719.1-201ENST00000566847 864 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AL596442.2-201ENST00000610240 980 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AC093909.1-201ENST00000504731 1122 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 KRT16P4-201ENST00000453883 522 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 AC011506.1-201ENST00000474329 610 ntBASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC8.19□□□□□ -1.1
SYNE2Q8WXH0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AL512604.3-201ENST00000569583 964 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 ZNF259P1-201ENST00000407656 1365 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LBH-203ENST00000404397 543 ntTSL 4 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LBH-204ENST00000406087 559 ntTSL 4 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 CCDC74BP1-201ENST00000508880 1123 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AL023973.1-201ENST00000624619 620 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SPDYE13P-201ENST00000445314 798 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LINC01711-201ENST00000598340 967 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms