Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD5Q8TDI0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 GCSHP5-201ENST00000443090 522 ntBASIC20.29■□□□□ 0.84
CHD5Q8TDI0 YBX1P10-201ENST00000444752 975 ntBASIC20.29■□□□□ 0.84
CHD5Q8TDI0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD5Q8TDI0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 AC073648.6-201ENST00000641589 218 ntBASIC20.28■□□□□ 0.84
CHD5Q8TDI0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 FAM201B-201ENST00000458407 597 ntBASIC20.28■□□□□ 0.84
CHD5Q8TDI0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 AC124016.1-201ENST00000609552 612 ntBASIC20.28■□□□□ 0.84
CHD5Q8TDI0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD5Q8TDI0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 AL391422.3-201ENST00000603791 2761 ntBASIC20.27■□□□□ 0.84
CHD5Q8TDI0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 AC018553.1-201ENST00000616682 1458 ntBASIC20.27■□□□□ 0.84
CHD5Q8TDI0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 AC128676.1-201ENST00000454392 318 ntBASIC20.27■□□□□ 0.84
CHD5Q8TDI0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD5Q8TDI0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CHD5Q8TDI0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHD5Q8TDI0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD5Q8TDI0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD5Q8TDI0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 AL359736.2-201ENST00000621992 437 ntBASIC20.25■□□□□ 0.83
CHD5Q8TDI0 TMEM191A-211ENST00000637163 1067 ntBASIC20.25■□□□□ 0.83
CHD5Q8TDI0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD5Q8TDI0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms