Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 AC233992.3-201ENST00000607491 485 ntBASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 AC008175.2-201ENST00000612840 297 ntBASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 KRT8P36-201ENST00000489121 1440 ntBASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 AC020763.4-201ENST00000623414 4170 ntBASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 POU5F1P4-201ENST00000413175 1085 ntBASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 MIR4767-201ENST00000582827 78 ntBASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 AC005332.8-201ENST00000622750 2735 ntBASIC18.22■□□□□ 0.51
CNIH3Q8TBE1 LINC01465-201ENST00000408887 1940 ntBASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 AL049812.1-201ENST00000432563 2267 ntBASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 AL138781.2-201ENST00000617896 1843 ntBASIC18.21■□□□□ 0.51
CNIH3Q8TBE1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.5
CNIH3Q8TBE1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNIH3Q8TBE1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms