Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 AL445228.2-201ENST00000605589 952 ntBASIC15.6■□□□□ 0.09
LINC01006Q8NI28 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 LINC01568-207ENST00000641790 1380 ntBASIC15.6■□□□□ 0.09
LINC01006Q8NI28 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01006Q8NI28 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 PLK5-205ENST00000642079 1969 ntBASIC15.59■□□□□ 0.09
LINC01006Q8NI28 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 NAPSB-206ENST00000562112 1266 ntBASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01006Q8NI28 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 AL390955.1-201ENST00000428694 934 ntBASIC15.58■□□□□ 0.08
LINC01006Q8NI28 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 FITM1-202ENST00000559294 800 ntBASIC15.58■□□□□ 0.08
LINC01006Q8NI28 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 FEM1AP4-201ENST00000443167 1987 ntBASIC15.58■□□□□ 0.08
LINC01006Q8NI28 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LINC01006Q8NI28 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AC005521.1-201ENST00000393351 872 ntBASIC15.57■□□□□ 0.08
LINC01006Q8NI28 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AL049597.2-201ENST00000565575 961 ntBASIC15.57■□□□□ 0.08
LINC01006Q8NI28 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LINC01006Q8NI28 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms