Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CFAP61Q8NHU2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 AL162377.1-201ENST00000618844 1793 ntBASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 AC068338.2-201ENST00000563278 1430 ntBASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP61Q8NHU2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC112907.3-201ENST00000577781 2400 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC026185.1-201ENST00000445748 174 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC007322.4-201ENST00000509611 723 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC016405.3-201ENST00000607710 860 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC020907.5-201ENST00000624372 1936 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 AC027702.1-201ENST00000563810 1770 ntBASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP61Q8NHU2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP61Q8NHU2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms