Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.99□□□□□ -0.65
SPTSSBQ8NFR3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 DUX4L29-201ENST00000425409 679 ntBASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 AC139713.2-201ENST00000641328 2723 ntBASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC10.98□□□□□ -0.65
SPTSSBQ8NFR3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 AL161772.1-201ENST00000610494 4412 ntBASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 AL049812.1-201ENST00000432563 2267 ntBASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SPTSSBQ8NFR3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 AC046158.3-201ENST00000624947 2558 ntBASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms