Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATP11CQ8NB49 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP11CQ8NB49 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP11CQ8NB49 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 RNA5SP413-201ENST00000516373 109 ntBASIC20.81■□□□□ 0.92
ATP11CQ8NB49 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 AC105020.6-201ENST00000621523 1217 ntBASIC20.81■□□□□ 0.92
ATP11CQ8NB49 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP11CQ8NB49 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP11CQ8NB49 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATP11CQ8NB49 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP11CQ8NB49 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP11CQ8NB49 AL356652.1-201ENST00000615962 565 ntBASIC20.77■□□□□ 0.92
ATP11CQ8NB49 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms