Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 AL358852.1-201ENST00000623174 1268 ntBASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 TPRG1LP1-201ENST00000598702 760 ntBASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 AL354811.1-201ENST00000610286 706 ntBASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC71LQ8N9Z2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 AC093484.2-201ENST00000580996 2166 ntBASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 TREX1-205ENST00000625293 1783 ntBASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC71LQ8N9Z2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CCDC71LQ8N9Z2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CCDC71LQ8N9Z2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC71LQ8N9Z2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC71LQ8N9Z2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 AC007322.3-201ENST00000426526 701 ntBASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 AC010141.2-201ENST00000452426 721 ntBASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC71LQ8N9Z2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms