Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 KRT17P2-201ENST00000300992 1314 ntBASIC21.22■□□□□ 0.99
VARS2Q5ST30 HTR7P1-201ENST00000538670 1336 ntBASIC21.22■□□□□ 0.99
VARS2Q5ST30 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VARS2Q5ST30 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
VARS2Q5ST30 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
VARS2Q5ST30 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VARS2Q5ST30 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.21■□□□□ 0.99
VARS2Q5ST30 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
VARS2Q5ST30 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 MIR4785-201ENST00000585005 73 ntBASIC21.2■□□□□ 0.98
VARS2Q5ST30 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VARS2Q5ST30 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VARS2Q5ST30 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARS2Q5ST30 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARS2Q5ST30 KRT18P21-201ENST00000515767 1272 ntBASIC21.19■□□□□ 0.98
VARS2Q5ST30 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 AF186192.3-201ENST00000583427 947 ntBASIC21.19■□□□□ 0.98
VARS2Q5ST30 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
VARS2Q5ST30 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VARS2Q5ST30 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
VARS2Q5ST30 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.18■□□□□ 0.98
VARS2Q5ST30 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.18■□□□□ 0.98
VARS2Q5ST30 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.18■□□□□ 0.98
VARS2Q5ST30 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.18■□□□□ 0.98
VARS2Q5ST30 AC004264.1-201ENST00000608354 794 ntBASIC21.18■□□□□ 0.98
VARS2Q5ST30 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
VARS2Q5ST30 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VARS2Q5ST30 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.17■□□□□ 0.98
VARS2Q5ST30 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.17■□□□□ 0.98
VARS2Q5ST30 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms