Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 UNC93B2-201ENST00000285383 730 ntBASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 KSR1P1-201ENST00000446298 240 ntBASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRTCAP3Q53RY4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRTCAP3Q53RY4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
KRTCAP3Q53RY4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
KRTCAP3Q53RY4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRTCAP3Q53RY4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KRTCAP3Q53RY4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRTCAP3Q53RY4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 NIFKP9-201ENST00000419265 221 ntBASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 RBM17P1-201ENST00000453646 1190 ntBASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KRTCAP3Q53RY4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms