Protein–RNA interactions for Protein: Q3E827

LSO1, Protein LSO1, yeastyeast

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSO1Q3E827 PKH3YDR466W 2697 nt1.88□□□□□ -2.11
LSO1Q3E827 YJL127W-AYJL127W-A 117 nt1.88□□□□□ -2.11
LSO1Q3E827 BST1YFL025C 3090 nt1.88□□□□□ -2.11
LSO1Q3E827 NUP145YGL092W 3954 nt1.87□□□□□ -2.11
LSO1Q3E827 IRC20YLR247C 4671 nt1.85□□□□□ -2.11
LSO1Q3E827 ROM2YLR371W 4071 nt1.85□□□□□ -2.11
LSO1Q3E827 ASE1YOR058C 2658 nt1.84□□□□□ -2.11
LSO1Q3E827 CDC25YLR310C 4770 nt1.84□□□□□ -2.11
LSO1Q3E827 KAP120YPL125W 3099 nt1.84□□□□□ -2.12
LSO1Q3E827 YDR210WYDR210W 228 nt1.83□□□□□ -2.12
LSO1Q3E827 RAD9YDR217C 3930 nt1.83□□□□□ -2.12
LSO1Q3E827 RCO1YMR075W 2055 nt1.82□□□□□ -2.12
LSO1Q3E827 AZF1YOR113W 2745 nt1.82□□□□□ -2.12
LSO1Q3E827 SEC3YER008C 4011 nt1.82□□□□□ -2.12
LSO1Q3E827 NUP188YML103C 4968 nt1.81□□□□□ -2.12
LSO1Q3E827 PEP1YBL017C 4740 nt1.8□□□□□ -2.12
LSO1Q3E827 DNF3YMR162C 4971 nt1.8□□□□□ -2.12
LSO1Q3E827 YGR146C-AYGR146C-A 162 nt1.79□□□□□ -2.12
LSO1Q3E827 VPS15YBR097W 4365 nt1.79□□□□□ -2.12
LSO1Q3E827 COG6YNL041C 2520 nt1.79□□□□□ -2.12
LSO1Q3E827 TRM732YMR259C 4263 nt1.79□□□□□ -2.12
LSO1Q3E827 SEC8YPR055W 3198 nt1.78□□□□□ -2.12
LSO1Q3E827 PRP16YKR086W 3216 nt1.78□□□□□ -2.13
LSO1Q3E827 CFT1YDR301W 4074 nt1.77□□□□□ -2.13
LSO1Q3E827 BIR1YJR089W 2865 nt1.77□□□□□ -2.13
LSO1Q3E827 EST2YLR318W 2655 nt1.76□□□□□ -2.13
LSO1Q3E827 BEM3YPL115C 3387 nt1.76□□□□□ -2.13
LSO1Q3E827 YNL266WYNL266W 420 nt1.75□□□□□ -2.13
LSO1Q3E827 SEC1YDR164C 2175 nt1.74□□□□□ -2.13
LSO1Q3E827 RPM2YML091C 3609 nt1.73□□□□□ -2.13
LSO1Q3E827 FAB1YFR019W 6837 nt1.72□□□□□ -2.13
LSO1Q3E827 YLR399W-AYLR399W-A 105 nt1.72□□□□□ -2.13
LSO1Q3E827 SXM1YDR395W 2835 nt1.72□□□□□ -2.13
LSO1Q3E827 YDL073WYDL073W 2955 nt1.7□□□□□ -2.14
LSO1Q3E827 YIL142C-AYIL142C-A 333 nt1.7□□□□□ -2.14
LSO1Q3E827 tS(GCU)Q1tS(GCU)Q1 86 nt1.69□□□□□ -2.14
LSO1Q3E827 YBR072C-AYBR072C-A 162 nt1.69□□□□□ -2.14
LSO1Q3E827 snR81snR81 201 nt1.68□□□□□ -2.14
LSO1Q3E827 YPR160W-AYPR160W-A 81 nt1.67□□□□□ -2.14
LSO1Q3E827 tN(GUU)QtN(GUU)Q 71 nt1.66□□□□□ -2.14
LSO1Q3E827 YAL037C-AYAL037C-A 93 nt1.66□□□□□ -2.14
LSO1Q3E827 CLU1YMR012W 3834 nt1.66□□□□□ -2.14
LSO1Q3E827 MSN5YDR335W 3675 nt1.64□□□□□ -2.15
LSO1Q3E827 SPC110YDR356W 2835 nt1.64□□□□□ -2.15
LSO1Q3E827 YSP1YHR155W 3687 nt1.64□□□□□ -2.15
LSO1Q3E827 YMR272W-BYMR272W-B 108 nt1.64□□□□□ -2.15
LSO1Q3E827 CDC39YCR093W 6327 nt1.64□□□□□ -2.15
LSO1Q3E827 UBP3YER151C 2739 nt1.63□□□□□ -2.15
LSO1Q3E827 PET127YOR017W 2403 nt1.62□□□□□ -2.15
LSO1Q3E827 FYV8YGR196C 2454 nt1.62□□□□□ -2.15
LSO1Q3E827 BRR2YER172C 6492 nt1.6□□□□□ -2.15
LSO1Q3E827 SSK2YNR031C 4740 nt1.59□□□□□ -2.16
LSO1Q3E827 YLL066W-BYLL066W-B 171 nt1.58□□□□□ -2.16
LSO1Q3E827 YBR196C-AYBR196C-A 150 nt1.58□□□□□ -2.16
LSO1Q3E827 GLG1YKR058W 1851 nt1.56□□□□□ -2.16
LSO1Q3E827 YOL083C-AYOL083C-A 141 nt1.56□□□□□ -2.16
LSO1Q3E827 PIK1YNL267W 3201 nt1.54□□□□□ -2.16
LSO1Q3E827 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
LSO1Q3E827 ULP2YIL031W 3105 nt1.53□□□□□ -2.16
LSO1Q3E827 NNF2YGR089W 2811 nt1.53□□□□□ -2.16
LSO1Q3E827 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
LSO1Q3E827 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
LSO1Q3E827 snR45snR45 172 nt1.52□□□□□ -2.17
LSO1Q3E827 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
LSO1Q3E827 SEC10YLR166C 2616 nt1.5□□□□□ -2.17
LSO1Q3E827 REV3YPL167C 4515 nt1.5□□□□□ -2.17
LSO1Q3E827 MEC1YBR136W 7107 nt1.49□□□□□ -2.17
LSO1Q3E827 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
LSO1Q3E827 snR62snR62 100 nt1.48□□□□□ -2.17
LSO1Q3E827 SPT7YBR081C 3999 nt1.47□□□□□ -2.17
LSO1Q3E827 YBL071C-BYBL071C-B 99 nt1.46□□□□□ -2.18
LSO1Q3E827 MSH3YCR092C 3057 nt1.45□□□□□ -2.18
LSO1Q3E827 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
LSO1Q3E827 YGR130CYGR130C 2451 nt1.42□□□□□ -2.18
LSO1Q3E827 YBL100W-CYBL100W-C 120 nt1.42□□□□□ -2.18
LSO1Q3E827 ANS1YHR126C 480 nt1.41□□□□□ -2.18
LSO1Q3E827 RPS26AYGL189C 360 nt1.4□□□□□ -2.19
LSO1Q3E827 YLL006W-AYLL006W-A 177 nt1.4□□□□□ -2.19
LSO1Q3E827 YLR286W-AYLR286W-A 135 nt1.39□□□□□ -2.19
LSO1Q3E827 HUG1YML058W-A 207 nt1.39□□□□□ -2.19
LSO1Q3E827 CSE1YGL238W 2883 nt1.38□□□□□ -2.19
LSO1Q3E827 tD(GUC)QtD(GUC)Q 75 nt1.37□□□□□ -2.19
LSO1Q3E827 YOL164W-AYOL164W-A 183 nt1.34□□□□□ -2.19
LSO1Q3E827 EST1YLR233C 2100 nt1.34□□□□□ -2.2
LSO1Q3E827 snR69snR69 101 nt1.33□□□□□ -2.2
LSO1Q3E827 CAT8YMR280C 4302 nt1.31□□□□□ -2.2
LSO1Q3E827 YGR240C-AYGR240C-A 201 nt1.31□□□□□ -2.2
LSO1Q3E827 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
LSO1Q3E827 YDR034C-AYDR034C-A 177 nt1.3□□□□□ -2.2
LSO1Q3E827 NIP1YMR309C 2439 nt1.29□□□□□ -2.2
LSO1Q3E827 YLR299C-AYLR299C-A 93 nt1.27□□□□□ -2.21
LSO1Q3E827 NST1YNL091W 3723 nt1.27□□□□□ -2.21
LSO1Q3E827 RKR1YMR247C 4689 nt1.26□□□□□ -2.21
LSO1Q3E827 RDS3YPR094W 324 nt1.26□□□□□ -2.21
LSO1Q3E827 NUP192YJL039C 5052 nt1.25□□□□□ -2.21
LSO1Q3E827 YDL159C-BYDL159C-B 177 nt1.25□□□□□ -2.21
LSO1Q3E827 YJL077W-AYJL077W-A 87 nt1.24□□□□□ -2.21
LSO1Q3E827 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
LSO1Q3E827 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
LSO1Q3E827 BUL2YML111W 2763 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms