Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZIC1Q15915 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ZIC1Q15915 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.18■□□□□ 0.66
ZIC1Q15915 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.18■□□□□ 0.66
ZIC1Q15915 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZIC1Q15915 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZIC1Q15915 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZIC1Q15915 KRT8P20-201ENST00000423953 1409 ntBASIC19.17■□□□□ 0.66
ZIC1Q15915 KRT8P17-201ENST00000453110 1448 ntBASIC19.17■□□□□ 0.66
ZIC1Q15915 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
ZIC1Q15915 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.17■□□□□ 0.66
ZIC1Q15915 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.17■□□□□ 0.66
ZIC1Q15915 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.17■□□□□ 0.66
ZIC1Q15915 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.17■□□□□ 0.66
ZIC1Q15915 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
ZIC1Q15915 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.17■□□□□ 0.66
ZIC1Q15915 MTDHP1-201ENST00000605323 784 ntBASIC19.17■□□□□ 0.66
ZIC1Q15915 AL359736.2-201ENST00000621992 437 ntBASIC19.17■□□□□ 0.66
ZIC1Q15915 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
ZIC1Q15915 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
ZIC1Q15915 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZIC1Q15915 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 AC099778.1-201ENST00000568593 1911 ntBASIC19.16■□□□□ 0.66
ZIC1Q15915 PKD1P6-201ENST00000343738 4769 ntBASIC19.16■□□□□ 0.66
ZIC1Q15915 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
ZIC1Q15915 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.16■□□□□ 0.66
ZIC1Q15915 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC1Q15915 C1QBPP2-201ENST00000528754 825 ntBASIC19.16■□□□□ 0.66
ZIC1Q15915 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC1Q15915 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.16■□□□□ 0.66
ZIC1Q15915 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZIC1Q15915 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.15■□□□□ 0.66
ZIC1Q15915 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ZIC1Q15915 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.15■□□□□ 0.66
ZIC1Q15915 HLA-G-202ENST00000376815 851 ntBASIC19.15■□□□□ 0.66
ZIC1Q15915 HLA-G-203ENST00000376818 1127 ntBASIC19.15■□□□□ 0.66
ZIC1Q15915 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.15■□□□□ 0.66
ZIC1Q15915 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 RPPH1-201ENST00000516869 333 ntBASIC19.15■□□□□ 0.66
ZIC1Q15915 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ZIC1Q15915 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
ZIC1Q15915 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.15■□□□□ 0.66
ZIC1Q15915 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZIC1Q15915 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
ZIC1Q15915 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.14■□□□□ 0.66
ZIC1Q15915 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ZIC1Q15915 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.14■□□□□ 0.66
ZIC1Q15915 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.14■□□□□ 0.65
ZIC1Q15915 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ZIC1Q15915 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
ZIC1Q15915 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.14■□□□□ 0.65
ZIC1Q15915 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.14■□□□□ 0.65
ZIC1Q15915 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.14■□□□□ 0.65
ZIC1Q15915 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms