Protein–RNA interactions for Protein: Q12441

TY1A-DR3, Transposon Ty1-DR3 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-DR3Q12441 MSB1YOR188W 3414 nt1.97□□□□□ -2.09
TY1A-DR3Q12441 DGR1YNL130C-A 147 nt1.96□□□□□ -2.1
TY1A-DR3Q12441 tF(GAA)DtF(GAA)D 73 nt1.95□□□□□ -2.1
TY1A-DR3Q12441 tF(GAA)NtF(GAA)N 73 nt1.95□□□□□ -2.1
TY1A-DR3Q12441 PIK1YNL267W 3201 nt1.95□□□□□ -2.1
TY1A-DR3Q12441 UBR2YLR024C 5619 nt1.94□□□□□ -2.1
TY1A-DR3Q12441 tD(GUC)QtD(GUC)Q 75 nt1.94□□□□□ -2.1
TY1A-DR3Q12441 ANS1YHR126C 480 nt1.94□□□□□ -2.1
TY1A-DR3Q12441 USO1YDL058W 5373 nt1.94□□□□□ -2.1
TY1A-DR3Q12441 BPH1YCR032W 6504 nt1.93□□□□□ -2.1
TY1A-DR3Q12441 CDC25YLR310C 4770 nt1.93□□□□□ -2.1
TY1A-DR3Q12441 SEC8YPR055W 3198 nt1.92□□□□□ -2.1
TY1A-DR3Q12441 KAP122YGL016W 3246 nt1.92□□□□□ -2.1
TY1A-DR3Q12441 YKL225WYKL225W 348 nt1.92□□□□□ -2.1
TY1A-DR3Q12441 YLR299C-AYLR299C-A 93 nt1.92□□□□□ -2.1
TY1A-DR3Q12441 NNF2YGR089W 2811 nt1.91□□□□□ -2.1
TY1A-DR3Q12441 SKI3YPR189W 4299 nt1.91□□□□□ -2.1
TY1A-DR3Q12441 SIR4YDR227W 4077 nt1.9□□□□□ -2.11
TY1A-DR3Q12441 MGA2YIR033W 3342 nt1.89□□□□□ -2.11
TY1A-DR3Q12441 UTP22YGR090W 3714 nt1.89□□□□□ -2.11
TY1A-DR3Q12441 SEC31YDL195W 3822 nt1.87□□□□□ -2.11
TY1A-DR3Q12441 SCD5YOR329C 2619 nt1.87□□□□□ -2.11
TY1A-DR3Q12441 YCS4YLR272C 3531 nt1.86□□□□□ -2.11
TY1A-DR3Q12441 ATG9YDL149W 2994 nt1.86□□□□□ -2.11
TY1A-DR3Q12441 YSP1YHR155W 3687 nt1.86□□□□□ -2.11
TY1A-DR3Q12441 SXM1YDR395W 2835 nt1.85□□□□□ -2.11
TY1A-DR3Q12441 TOR2YKL203C 7425 nt1.85□□□□□ -2.11
TY1A-DR3Q12441 MSN5YDR335W 3675 nt1.85□□□□□ -2.11
TY1A-DR3Q12441 YPR160W-AYPR160W-A 81 nt1.84□□□□□ -2.11
TY1A-DR3Q12441 YDL159C-BYDL159C-B 177 nt1.83□□□□□ -2.12
TY1A-DR3Q12441 YLR399W-AYLR399W-A 105 nt1.83□□□□□ -2.12
TY1A-DR3Q12441 ULP2YIL031W 3105 nt1.83□□□□□ -2.12
TY1A-DR3Q12441 NEO1YIL048W 3456 nt1.83□□□□□ -2.12
TY1A-DR3Q12441 tN(GUU)QtN(GUU)Q 71 nt1.82□□□□□ -2.12
TY1A-DR3Q12441 MBB1YJL199C 327 nt1.82□□□□□ -2.12
TY1A-DR3Q12441 DNA2YHR164C 4569 nt1.82□□□□□ -2.12
TY1A-DR3Q12441 PDR11YIL013C 4236 nt1.81□□□□□ -2.12
TY1A-DR3Q12441 REV3YPL167C 4515 nt1.81□□□□□ -2.12
TY1A-DR3Q12441 KCS1YDR017C 3153 nt1.8□□□□□ -2.12
TY1A-DR3Q12441 YHR214C-BYHR214C-B 5382 nt1.8□□□□□ -2.12
TY1A-DR3Q12441 EST1YLR233C 2100 nt1.8□□□□□ -2.12
TY1A-DR3Q12441 SEC3YER008C 4011 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)G1tW(CCA)G1 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)G2tW(CCA)G2 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)JtW(CCA)J 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)KtW(CCA)K 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)MtW(CCA)M 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 tW(CCA)PtW(CCA)P 72 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 YKL096C-BYKL096C-B 150 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 NUP145YGL092W 3954 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 SWI4YER111C 3282 nt1.79□□□□□ -2.12
TY1A-DR3Q12441 RPL41AYDL184C 78 nt1.78□□□□□ -2.12
TY1A-DR3Q12441 YHR180C-BYHR180C-B 105 nt1.78□□□□□ -2.12
TY1A-DR3Q12441 YLR419WYLR419W 4308 nt1.77□□□□□ -2.13
TY1A-DR3Q12441 snR70snR70 164 nt1.77□□□□□ -2.13
TY1A-DR3Q12441 BRE1YDL074C 2103 nt1.77□□□□□ -2.13
TY1A-DR3Q12441 YMR045CYMR045C 5268 nt1.77□□□□□ -2.13
TY1A-DR3Q12441 snR69snR69 101 nt1.76□□□□□ -2.13
TY1A-DR3Q12441 YER078W-AYER078W-A 165 nt1.76□□□□□ -2.13
TY1A-DR3Q12441 SAC3YDR159W 3906 nt1.75□□□□□ -2.13
TY1A-DR3Q12441 FKS3YMR306W 5358 nt1.75□□□□□ -2.13
TY1A-DR3Q12441 HUG1YML058W-A 207 nt1.75□□□□□ -2.13
TY1A-DR3Q12441 RDS3YPR094W 324 nt1.75□□□□□ -2.13
TY1A-DR3Q12441 IRC20YLR247C 4671 nt1.74□□□□□ -2.13
TY1A-DR3Q12441 snR75snR75 89 nt1.74□□□□□ -2.13
TY1A-DR3Q12441 YLR149C-AYLR149C-A 87 nt1.74□□□□□ -2.13
TY1A-DR3Q12441 CSE1YGL238W 2883 nt1.73□□□□□ -2.13
TY1A-DR3Q12441 TMA7YLR262C-A 195 nt1.73□□□□□ -2.13
TY1A-DR3Q12441 YMR247W-AYMR247W-A 144 nt1.73□□□□□ -2.13
TY1A-DR3Q12441 PET127YOR017W 2403 nt1.73□□□□□ -2.13
TY1A-DR3Q12441 FKS1YLR342W 5631 nt1.73□□□□□ -2.13
TY1A-DR3Q12441 YBR296C-AYBR296C-A 120 nt1.7□□□□□ -2.14
TY1A-DR3Q12441 MSH3YCR092C 3057 nt1.69□□□□□ -2.14
TY1A-DR3Q12441 SKI7YOR076C 2244 nt1.69□□□□□ -2.14
TY1A-DR3Q12441 YML054C-AYML054C-A 159 nt1.69□□□□□ -2.14
TY1A-DR3Q12441 MON2YNL297C 4911 nt1.69□□□□□ -2.14
TY1A-DR3Q12441 BST1YFL025C 3090 nt1.68□□□□□ -2.14
TY1A-DR3Q12441 PKH3YDR466W 2697 nt1.67□□□□□ -2.14
TY1A-DR3Q12441 YJL077W-AYJL077W-A 87 nt1.65□□□□□ -2.15
TY1A-DR3Q12441 NUP170YBL079W 4509 nt1.65□□□□□ -2.15
TY1A-DR3Q12441 PMD1YER132C 5262 nt1.64□□□□□ -2.15
TY1A-DR3Q12441 YDL159W-AYDL159W-A 132 nt1.64□□□□□ -2.15
TY1A-DR3Q12441 SIP4YJL089W 2490 nt1.63□□□□□ -2.15
TY1A-DR3Q12441 NUP188YML103C 4968 nt1.63□□□□□ -2.15
TY1A-DR3Q12441 tT(UGU)HtT(UGU)H 72 nt1.61□□□□□ -2.15
TY1A-DR3Q12441 VPS15YBR097W 4365 nt1.6□□□□□ -2.15
TY1A-DR3Q12441 FYV8YGR196C 2454 nt1.6□□□□□ -2.15
TY1A-DR3Q12441 CLU1YMR012W 3834 nt1.59□□□□□ -2.15
TY1A-DR3Q12441 YLL006W-AYLL006W-A 177 nt1.59□□□□□ -2.15
TY1A-DR3Q12441 snR38snR38 95 nt1.59□□□□□ -2.15
TY1A-DR3Q12441 YOR093CYOR093C 4947 nt1.58□□□□□ -2.16
TY1A-DR3Q12441 BUL2YML111W 2763 nt1.58□□□□□ -2.16
TY1A-DR3Q12441 tQ(UUG)QtQ(UUG)Q 76 nt1.58□□□□□ -2.16
TY1A-DR3Q12441 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
TY1A-DR3Q12441 CAT8YMR280C 4302 nt1.57□□□□□ -2.16
TY1A-DR3Q12441 PAU12YGR294W 363 nt1.57□□□□□ -2.16
TY1A-DR3Q12441 AI1Q0050 2505 nt1.57□□□□□ -2.16
TY1A-DR3Q12441 EST2YLR318W 2655 nt1.56□□□□□ -2.16
TY1A-DR3Q12441 NIP1YMR309C 2439 nt1.56□□□□□ -2.16
TY1A-DR3Q12441 YGR122C-AYGR122C-A 129 nt1.56□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms