Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 MON2YNL297C 4911 nt1.96□□□□□ -2.1
MSH6Q03834 YLR422WYLR422W 5799 nt1.96□□□□□ -2.1
MSH6Q03834 SKI3YPR189W 4299 nt1.95□□□□□ -2.1
MSH6Q03834 MEC1YBR136W 7107 nt1.94□□□□□ -2.1
MSH6Q03834 STO1YMR125W 2586 nt1.94□□□□□ -2.1
MSH6Q03834 RPS26AYGL189C 360 nt1.94□□□□□ -2.1
MSH6Q03834 tT(UGU)HtT(UGU)H 72 nt1.94□□□□□ -2.1
MSH6Q03834 YDR371C-AYDR371C-A 105 nt1.93□□□□□ -2.1
MSH6Q03834 FYV10YIL097W 1551 nt1.93□□□□□ -2.1
MSH6Q03834 YDL073WYDL073W 2955 nt1.92□□□□□ -2.1
MSH6Q03834 YJL127W-AYJL127W-A 117 nt1.92□□□□□ -2.1
MSH6Q03834 YLR041WYLR041W 321 nt1.92□□□□□ -2.1
MSH6Q03834 GEA2YEL022W 4380 nt1.92□□□□□ -2.1
MSH6Q03834 NOP9YJL010C 2001 nt1.91□□□□□ -2.1
MSH6Q03834 YLR232WYLR232W 348 nt1.91□□□□□ -2.1
MSH6Q03834 snR53snR53 91 nt1.91□□□□□ -2.1
MSH6Q03834 GLG1YKR058W 1851 nt1.9□□□□□ -2.1
MSH6Q03834 RAD9YDR217C 3930 nt1.9□□□□□ -2.1
MSH6Q03834 KAP122YGL016W 3246 nt1.9□□□□□ -2.11
MSH6Q03834 WAR1YML076C 2835 nt1.89□□□□□ -2.11
MSH6Q03834 YGR146C-AYGR146C-A 162 nt1.89□□□□□ -2.11
MSH6Q03834 YMR272W-BYMR272W-B 108 nt1.89□□□□□ -2.11
MSH6Q03834 YOL164W-AYOL164W-A 183 nt1.88□□□□□ -2.11
MSH6Q03834 snR190snR190 190 nt1.88□□□□□ -2.11
MSH6Q03834 IRA1YBR140C 9279 nt1.87□□□□□ -2.11
MSH6Q03834 PMD1YER132C 5262 nt1.87□□□□□ -2.11
MSH6Q03834 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
MSH6Q03834 YGR240C-AYGR240C-A 201 nt1.86□□□□□ -2.11
MSH6Q03834 RPL26BYGR034W 384 nt1.85□□□□□ -2.11
MSH6Q03834 KCS1YDR017C 3153 nt1.84□□□□□ -2.11
MSH6Q03834 ORC3YLL004W 1851 nt1.84□□□□□ -2.11
MSH6Q03834 APL3YBL037W 3078 nt1.84□□□□□ -2.12
MSH6Q03834 YLR286W-AYLR286W-A 135 nt1.83□□□□□ -2.12
MSH6Q03834 ASE1YOR058C 2658 nt1.83□□□□□ -2.12
MSH6Q03834 IRC20YLR247C 4671 nt1.81□□□□□ -2.12
MSH6Q03834 VPS15YBR097W 4365 nt1.81□□□□□ -2.12
MSH6Q03834 RPM2YML091C 3609 nt1.81□□□□□ -2.12
MSH6Q03834 CHS1YNL192W 3396 nt1.81□□□□□ -2.12
MSH6Q03834 CFT1YDR301W 4074 nt1.8□□□□□ -2.12
MSH6Q03834 UBP3YER151C 2739 nt1.8□□□□□ -2.12
MSH6Q03834 YBL100W-CYBL100W-C 120 nt1.79□□□□□ -2.12
MSH6Q03834 YBR196C-AYBR196C-A 150 nt1.79□□□□□ -2.12
MSH6Q03834 AZF1YOR113W 2745 nt1.79□□□□□ -2.12
MSH6Q03834 YBR200W-AYBR200W-A 165 nt1.78□□□□□ -2.12
MSH6Q03834 PIK1YNL267W 3201 nt1.78□□□□□ -2.13
MSH6Q03834 PKH3YDR466W 2697 nt1.77□□□□□ -2.13
MSH6Q03834 FIG2YCR089W 4830 nt1.77□□□□□ -2.13
MSH6Q03834 YCS4YLR272C 3531 nt1.77□□□□□ -2.13
MSH6Q03834 snR64snR64 101 nt1.76□□□□□ -2.13
MSH6Q03834 snR47snR47 99 nt1.76□□□□□ -2.13
MSH6Q03834 SWI4YER111C 3282 nt1.76□□□□□ -2.13
MSH6Q03834 NNF2YGR089W 2811 nt1.74□□□□□ -2.13
MSH6Q03834 BST1YFL025C 3090 nt1.74□□□□□ -2.13
MSH6Q03834 NUP188YML103C 4968 nt1.74□□□□□ -2.13
MSH6Q03834 PRP16YKR086W 3216 nt1.72□□□□□ -2.13
MSH6Q03834 BRR2YER172C 6492 nt1.72□□□□□ -2.13
MSH6Q03834 SEC10YLR166C 2616 nt1.71□□□□□ -2.14
MSH6Q03834 NUP145YGL092W 3954 nt1.71□□□□□ -2.14
MSH6Q03834 TRM732YMR259C 4263 nt1.7□□□□□ -2.14
MSH6Q03834 YPL060C-AYPL060C-A 3315 nt1.7□□□□□ -2.14
MSH6Q03834 NUP192YJL039C 5052 nt1.7□□□□□ -2.14
MSH6Q03834 SSK2YNR031C 4740 nt1.7□□□□□ -2.14
MSH6Q03834 BEM3YPL115C 3387 nt1.7□□□□□ -2.14
MSH6Q03834 ROM2YLR371W 4071 nt1.67□□□□□ -2.14
MSH6Q03834 SEC8YPR055W 3198 nt1.67□□□□□ -2.14
MSH6Q03834 MSH3YCR092C 3057 nt1.67□□□□□ -2.14
MSH6Q03834 SEC3YER008C 4011 nt1.66□□□□□ -2.14
MSH6Q03834 CAT8YMR280C 4302 nt1.64□□□□□ -2.15
MSH6Q03834 EST2YLR318W 2655 nt1.63□□□□□ -2.15
MSH6Q03834 tN(GUU)QtN(GUU)Q 71 nt1.63□□□□□ -2.15
MSH6Q03834 YBR109W-AYBR109W-A 225 nt1.63□□□□□ -2.15
MSH6Q03834 SXM1YDR395W 2835 nt1.62□□□□□ -2.15
MSH6Q03834 CLU1YMR012W 3834 nt1.61□□□□□ -2.15
MSH6Q03834 PET127YOR017W 2403 nt1.61□□□□□ -2.15
MSH6Q03834 ANS1YHR126C 480 nt1.6□□□□□ -2.15
MSH6Q03834 snR50snR50 90 nt1.6□□□□□ -2.15
MSH6Q03834 CCH1YGR217W 6120 nt1.6□□□□□ -2.15
MSH6Q03834 FYV8YGR196C 2454 nt1.59□□□□□ -2.15
MSH6Q03834 YLR399W-AYLR399W-A 105 nt1.59□□□□□ -2.15
MSH6Q03834 YKL225WYKL225W 348 nt1.58□□□□□ -2.16
MSH6Q03834 CDC25YLR310C 4770 nt1.58□□□□□ -2.16
MSH6Q03834 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
MSH6Q03834 YPR160W-AYPR160W-A 81 nt1.57□□□□□ -2.16
MSH6Q03834 CDC39YCR093W 6327 nt1.56□□□□□ -2.16
MSH6Q03834 tD(GUC)QtD(GUC)Q 75 nt1.56□□□□□ -2.16
MSH6Q03834 YNL284C-BYNL284C-B 5268 nt1.56□□□□□ -2.16
MSH6Q03834 LAA1YJL207C 6045 nt1.53□□□□□ -2.16
MSH6Q03834 YLR149C-AYLR149C-A 87 nt1.53□□□□□ -2.16
MSH6Q03834 YSP1YHR155W 3687 nt1.53□□□□□ -2.17
MSH6Q03834 ULP2YIL031W 3105 nt1.53□□□□□ -2.17
MSH6Q03834 SPC110YDR356W 2835 nt1.53□□□□□ -2.17
MSH6Q03834 EST1YLR233C 2100 nt1.52□□□□□ -2.17
MSH6Q03834 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
MSH6Q03834 NST1YNL091W 3723 nt1.51□□□□□ -2.17
MSH6Q03834 YLR299C-AYLR299C-A 93 nt1.51□□□□□ -2.17
MSH6Q03834 MSN5YDR335W 3675 nt1.5□□□□□ -2.17
MSH6Q03834 snR69snR69 101 nt1.47□□□□□ -2.17
MSH6Q03834 YKL096C-BYKL096C-B 150 nt1.47□□□□□ -2.17
MSH6Q03834 snR38snR38 95 nt1.47□□□□□ -2.17
MSH6Q03834 AI1Q0050 2505 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 125.7 ms