Protein–RNA interactions for Protein: P89105

CTR9, RNA polymerase-associated protein CTR9, yeastyeast

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTR9P89105 YLR422WYLR422W 5799 nt1.88□□□□□ -2.11
CTR9P89105 SET3YKR029C 2256 nt1.88□□□□□ -2.11
CTR9P89105 GEA2YEL022W 4380 nt1.88□□□□□ -2.11
CTR9P89105 FIG2YCR089W 4830 nt1.87□□□□□ -2.11
CTR9P89105 BRR2YER172C 6492 nt1.87□□□□□ -2.11
CTR9P89105 DNF3YMR162C 4971 nt1.86□□□□□ -2.11
CTR9P89105 tS(GCU)Q1tS(GCU)Q1 86 nt1.85□□□□□ -2.11
CTR9P89105 KAP122YGL016W 3246 nt1.85□□□□□ -2.11
CTR9P89105 KAP120YPL125W 3099 nt1.85□□□□□ -2.11
CTR9P89105 YDR210WYDR210W 228 nt1.83□□□□□ -2.12
CTR9P89105 YGR146C-AYGR146C-A 162 nt1.83□□□□□ -2.12
CTR9P89105 tQ(UUG)E2tQ(UUG)E2 72 nt1.83□□□□□ -2.12
CTR9P89105 BEM3YPL115C 3387 nt1.83□□□□□ -2.12
CTR9P89105 ROM2YLR371W 4071 nt1.83□□□□□ -2.12
CTR9P89105 RCO1YMR075W 2055 nt1.82□□□□□ -2.12
CTR9P89105 NUP157YER105C 4176 nt1.82□□□□□ -2.12
CTR9P89105 YNL266WYNL266W 420 nt1.82□□□□□ -2.12
CTR9P89105 YBR200W-AYBR200W-A 165 nt1.82□□□□□ -2.12
CTR9P89105 BIR1YJR089W 2865 nt1.82□□□□□ -2.12
CTR9P89105 CDC25YLR310C 4770 nt1.81□□□□□ -2.12
CTR9P89105 PET127YOR017W 2403 nt1.8□□□□□ -2.12
CTR9P89105 YCS4YLR272C 3531 nt1.8□□□□□ -2.12
CTR9P89105 YLL066W-BYLL066W-B 171 nt1.8□□□□□ -2.12
CTR9P89105 KCS1YDR017C 3153 nt1.8□□□□□ -2.12
CTR9P89105 PRP16YKR086W 3216 nt1.8□□□□□ -2.12
CTR9P89105 snR81snR81 201 nt1.79□□□□□ -2.12
CTR9P89105 YAL037C-AYAL037C-A 93 nt1.79□□□□□ -2.12
CTR9P89105 RAD9YDR217C 3930 nt1.78□□□□□ -2.12
CTR9P89105 COG6YNL041C 2520 nt1.78□□□□□ -2.12
CTR9P89105 SEC1YDR164C 2175 nt1.78□□□□□ -2.12
CTR9P89105 SWI4YER111C 3282 nt1.78□□□□□ -2.12
CTR9P89105 NUP145YGL092W 3954 nt1.78□□□□□ -2.12
CTR9P89105 YBR072C-AYBR072C-A 162 nt1.77□□□□□ -2.13
CTR9P89105 BST1YFL025C 3090 nt1.76□□□□□ -2.13
CTR9P89105 SEC8YPR055W 3198 nt1.75□□□□□ -2.13
CTR9P89105 MON2YNL297C 4911 nt1.75□□□□□ -2.13
CTR9P89105 FYV8YGR196C 2454 nt1.75□□□□□ -2.13
CTR9P89105 PIK1YNL267W 3201 nt1.74□□□□□ -2.13
CTR9P89105 AZF1YOR113W 2745 nt1.74□□□□□ -2.13
CTR9P89105 YDL073WYDL073W 2955 nt1.74□□□□□ -2.13
CTR9P89105 snR45snR45 172 nt1.73□□□□□ -2.13
CTR9P89105 RPM2YML091C 3609 nt1.72□□□□□ -2.13
CTR9P89105 YLR419WYLR419W 4308 nt1.71□□□□□ -2.14
CTR9P89105 MSN5YDR335W 3675 nt1.69□□□□□ -2.14
CTR9P89105 YLR399W-AYLR399W-A 105 nt1.68□□□□□ -2.14
CTR9P89105 CAT8YMR280C 4302 nt1.68□□□□□ -2.14
CTR9P89105 CCH1YGR217W 6120 nt1.68□□□□□ -2.14
CTR9P89105 SSK2YNR031C 4740 nt1.67□□□□□ -2.14
CTR9P89105 YBR196C-AYBR196C-A 150 nt1.67□□□□□ -2.14
CTR9P89105 ASE1YOR058C 2658 nt1.66□□□□□ -2.14
CTR9P89105 SEC3YER008C 4011 nt1.66□□□□□ -2.14
CTR9P89105 PMD1YER132C 5262 nt1.66□□□□□ -2.14
CTR9P89105 YOL083C-AYOL083C-A 141 nt1.66□□□□□ -2.14
CTR9P89105 snR62snR62 100 nt1.65□□□□□ -2.15
CTR9P89105 UBP3YER151C 2739 nt1.65□□□□□ -2.15
CTR9P89105 NUP188YML103C 4968 nt1.64□□□□□ -2.15
CTR9P89105 YSP1YHR155W 3687 nt1.63□□□□□ -2.15
CTR9P89105 EST2YLR318W 2655 nt1.63□□□□□ -2.15
CTR9P89105 SPC110YDR356W 2835 nt1.62□□□□□ -2.15
CTR9P89105 SXM1YDR395W 2835 nt1.62□□□□□ -2.15
CTR9P89105 YBL100W-CYBL100W-C 120 nt1.62□□□□□ -2.15
CTR9P89105 CLU1YMR012W 3834 nt1.61□□□□□ -2.15
CTR9P89105 YPR160W-AYPR160W-A 81 nt1.61□□□□□ -2.15
CTR9P89105 LAA1YJL207C 6045 nt1.6□□□□□ -2.15
CTR9P89105 tN(GUU)QtN(GUU)Q 71 nt1.59□□□□□ -2.15
CTR9P89105 GLG1YKR058W 1851 nt1.58□□□□□ -2.16
CTR9P89105 SEC10YLR166C 2616 nt1.56□□□□□ -2.16
CTR9P89105 YBL071C-BYBL071C-B 99 nt1.55□□□□□ -2.16
CTR9P89105 ULP2YIL031W 3105 nt1.51□□□□□ -2.17
CTR9P89105 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
CTR9P89105 NUP192YJL039C 5052 nt1.51□□□□□ -2.17
CTR9P89105 MSH3YCR092C 3057 nt1.49□□□□□ -2.17
CTR9P89105 NNF2YGR089W 2811 nt1.48□□□□□ -2.17
CTR9P89105 RPS26AYGL189C 360 nt1.48□□□□□ -2.17
CTR9P89105 TRM732YMR259C 4263 nt1.48□□□□□ -2.17
CTR9P89105 YDR034C-AYDR034C-A 177 nt1.47□□□□□ -2.17
CTR9P89105 YOL164W-AYOL164W-A 183 nt1.47□□□□□ -2.17
CTR9P89105 ANS1YHR126C 480 nt1.46□□□□□ -2.18
CTR9P89105 YGR240C-AYGR240C-A 201 nt1.45□□□□□ -2.18
CTR9P89105 YLR286W-AYLR286W-A 135 nt1.45□□□□□ -2.18
CTR9P89105 CDC39YCR093W 6327 nt1.45□□□□□ -2.18
CTR9P89105 CSE1YGL238W 2883 nt1.44□□□□□ -2.18
CTR9P89105 HUG1YML058W-A 207 nt1.43□□□□□ -2.18
CTR9P89105 tD(GUC)QtD(GUC)Q 75 nt1.42□□□□□ -2.18
CTR9P89105 BEM2YER155C 6504 nt1.41□□□□□ -2.18
CTR9P89105 YNL284C-BYNL284C-B 5268 nt1.39□□□□□ -2.19
CTR9P89105 YLL006W-AYLL006W-A 177 nt1.38□□□□□ -2.19
CTR9P89105 SPT7YBR081C 3999 nt1.38□□□□□ -2.19
CTR9P89105 snR69snR69 101 nt1.36□□□□□ -2.19
CTR9P89105 YGR130CYGR130C 2451 nt1.35□□□□□ -2.19
CTR9P89105 YLR299C-AYLR299C-A 93 nt1.35□□□□□ -2.19
CTR9P89105 snR47snR47 99 nt1.35□□□□□ -2.19
CTR9P89105 SCC2YDR180W 4482 nt1.34□□□□□ -2.19
CTR9P89105 EST1YLR233C 2100 nt1.34□□□□□ -2.19
CTR9P89105 RDS3YPR094W 324 nt1.32□□□□□ -2.2
CTR9P89105 YDL159C-BYDL159C-B 177 nt1.31□□□□□ -2.2
CTR9P89105 NST1YNL091W 3723 nt1.31□□□□□ -2.2
CTR9P89105 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
CTR9P89105 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
CTR9P89105 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms