Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPFP62306 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPFP62306 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.77■■□□□ 1.08
SNRPFP62306 AP001271.2-201ENST00000624018 1556 ntBASIC21.77■■□□□ 1.08
SNRPFP62306 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNRPFP62306 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.77■■□□□ 1.08
SNRPFP62306 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNRPFP62306 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.77■■□□□ 1.07
SNRPFP62306 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SNRPFP62306 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNRPFP62306 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.76■■□□□ 1.07
SNRPFP62306 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.76■■□□□ 1.07
SNRPFP62306 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.76■■□□□ 1.07
SNRPFP62306 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.76■■□□□ 1.07
SNRPFP62306 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 AL391422.3-201ENST00000603791 2761 ntBASIC21.76■■□□□ 1.07
SNRPFP62306 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRPFP62306 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.76■■□□□ 1.07
SNRPFP62306 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 PHGDH-210ENST00000641115 1638 ntBASIC21.76■■□□□ 1.07
SNRPFP62306 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNRPFP62306 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNRPFP62306 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SNRPFP62306 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SNRPFP62306 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
SNRPFP62306 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNRPFP62306 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.75■■□□□ 1.07
SNRPFP62306 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.75■■□□□ 1.07
SNRPFP62306 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.75■■□□□ 1.07
SNRPFP62306 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.75■■□□□ 1.07
SNRPFP62306 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SNRPFP62306 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.75■■□□□ 1.07
SNRPFP62306 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.75■■□□□ 1.07
SNRPFP62306 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.75■■□□□ 1.07
SNRPFP62306 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SNRPFP62306 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.74■■□□□ 1.07
SNRPFP62306 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SNRPFP62306 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.74■■□□□ 1.07
SNRPFP62306 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.74■■□□□ 1.07
SNRPFP62306 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.74■■□□□ 1.07
SNRPFP62306 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SNRPFP62306 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRPFP62306 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SNRPFP62306 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.73■■□□□ 1.07
SNRPFP62306 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SNRPFP62306 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.73■■□□□ 1.07
SNRPFP62306 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRPFP62306 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNRPFP62306 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.72■■□□□ 1.07
SNRPFP62306 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.72■■□□□ 1.07
SNRPFP62306 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms