Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKAP1LP55160 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1LP55160 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.93■■□□□ 1.1
NCKAP1LP55160 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.93■■□□□ 1.1
NCKAP1LP55160 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1LP55160 TSPY20P-201ENST00000450910 630 ntBASIC21.93■■□□□ 1.1
NCKAP1LP55160 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.93■■□□□ 1.1
NCKAP1LP55160 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.93■■□□□ 1.1
NCKAP1LP55160 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.93■■□□□ 1.1
NCKAP1LP55160 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1LP55160 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKAP1LP55160 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 AC124283.5-201ENST00000624661 1809 ntBASIC21.92■■□□□ 1.1
NCKAP1LP55160 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 POM121L13P-201ENST00000422362 380 ntBASIC21.92■■□□□ 1.1
NCKAP1LP55160 RPS2P52-201ENST00000469610 820 ntBASIC21.92■■□□□ 1.1
NCKAP1LP55160 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.92■■□□□ 1.1
NCKAP1LP55160 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.92■■□□□ 1.1
NCKAP1LP55160 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
NCKAP1LP55160 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.92■■□□□ 1.1
NCKAP1LP55160 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.92■■□□□ 1.1
NCKAP1LP55160 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKAP1LP55160 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCKAP1LP55160 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.91■■□□□ 1.1
NCKAP1LP55160 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NCKAP1LP55160 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCKAP1LP55160 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 AL691432.2-201ENST00000607222 2038 ntBASIC21.89■■□□□ 1.1
NCKAP1LP55160 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NCKAP1LP55160 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
NCKAP1LP55160 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.89■■□□□ 1.1
NCKAP1LP55160 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 TCF3P1-201ENST00000423021 1937 ntBASIC21.89■■□□□ 1.09
NCKAP1LP55160 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 ABHD17AP1-201ENST00000358206 933 ntBASIC21.89■■□□□ 1.09
NCKAP1LP55160 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.89■■□□□ 1.09
NCKAP1LP55160 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NCKAP1LP55160 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NCKAP1LP55160 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
NCKAP1LP55160 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.88■■□□□ 1.09
NCKAP1LP55160 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms