Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AL445228.2-201ENST00000605589 952 ntBASIC21.11■□□□□ 0.97
CLCN4P51793 AP000525.1-201ENST00000608286 694 ntBASIC21.11■□□□□ 0.97
CLCN4P51793 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN4P51793 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN4P51793 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 AL024507.2-201ENST00000606070 2574 ntBASIC21.1■□□□□ 0.97
CLCN4P51793 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN4P51793 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCN4P51793 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.1■□□□□ 0.97
CLCN4P51793 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN4P51793 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.1■□□□□ 0.97
CLCN4P51793 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN4P51793 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CLCN4P51793 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CLCN4P51793 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CLCN4P51793 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN4P51793 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN4P51793 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCN4P51793 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCN4P51793 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN4P51793 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLCN4P51793 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN4P51793 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCN4P51793 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.09■□□□□ 0.97
CLCN4P51793 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.09■□□□□ 0.97
CLCN4P51793 AC092865.7-201ENST00000641832 219 ntBASIC21.09■□□□□ 0.97
CLCN4P51793 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
CLCN4P51793 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CLCN4P51793 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLCN4P51793 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN4P51793 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN4P51793 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN4P51793 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCN4P51793 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCN4P51793 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCN4P51793 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 KRT8P20-201ENST00000423953 1409 ntBASIC21.08■□□□□ 0.97
CLCN4P51793 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCN4P51793 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.08■□□□□ 0.97
CLCN4P51793 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCN4P51793 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN4P51793 AL031963.3-201ENST00000606441 850 ntBASIC21.08■□□□□ 0.97
CLCN4P51793 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCN4P51793 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLCN4P51793 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLCN4P51793 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCN4P51793 MIR1238-201ENST00000408483 83 ntBASIC21.07■□□□□ 0.96
CLCN4P51793 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN4P51793 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.07■□□□□ 0.96
CLCN4P51793 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.07■□□□□ 0.96
CLCN4P51793 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.07■□□□□ 0.96
CLCN4P51793 AC005363.2-201ENST00000618631 242 ntBASIC21.07■□□□□ 0.96
CLCN4P51793 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN4P51793 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.07■□□□□ 0.96
CLCN4P51793 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN4P51793 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLCN4P51793 AC026310.3-201ENST00000625186 2373 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLCN4P51793 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.06■□□□□ 0.96
CLCN4P51793 NIFKP9-201ENST00000419265 221 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 KSR1P1-201ENST00000446298 240 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 AC116562.2-201ENST00000507042 360 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 KRT18P35-201ENST00000510488 1269 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.06■□□□□ 0.96
CLCN4P51793 CR392000.1-201ENST00000624770 1228 ntBASIC21.06■□□□□ 0.96
CLCN4P51793 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLCN4P51793 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.06■□□□□ 0.96
CLCN4P51793 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.06■□□□□ 0.96
CLCN4P51793 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms