Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB28P51157 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 ABHD17AP1-201ENST00000358206 933 ntBASIC19.32■□□□□ 0.68
RAB28P51157 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB28P51157 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB28P51157 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB28P51157 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB28P51157 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB28P51157 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB28P51157 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB28P51157 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAB28P51157 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
RAB28P51157 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAB28P51157 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB28P51157 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB28P51157 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RAB28P51157 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 KRT17P3-201ENST00000420566 1262 ntBASIC19.31■□□□□ 0.68
RAB28P51157 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB28P51157 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 AC006058.3-201ENST00000606217 1069 ntBASIC19.31■□□□□ 0.68
RAB28P51157 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RAB28P51157 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB28P51157 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB28P51157 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB28P51157 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RAB28P51157 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB28P51157 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 RPS2P52-201ENST00000469610 820 ntBASIC19.3■□□□□ 0.68
RAB28P51157 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
RAB28P51157 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB28P51157 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB28P51157 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.3■□□□□ 0.68
RAB28P51157 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB28P51157 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RAB28P51157 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB28P51157 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB28P51157 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RAB28P51157 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RAB28P51157 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB28P51157 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB28P51157 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB28P51157 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB28P51157 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RAB28P51157 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB28P51157 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB28P51157 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB28P51157 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB28P51157 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB28P51157 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ITM2C-210ENST00000620962 501 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms