Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 SGS1YMR190C 4344 nt2.08□□□□□ -2.08
NUP42P49686 ULP2YIL031W 3105 nt2.08□□□□□ -2.08
NUP42P49686 tN(GUU)QtN(GUU)Q 71 nt2.07□□□□□ -2.08
NUP42P49686 YOL098CYOL098C 3114 nt2.06□□□□□ -2.08
NUP42P49686 snR47snR47 99 nt2.05□□□□□ -2.08
NUP42P49686 ANS1YHR126C 480 nt2.04□□□□□ -2.08
NUP42P49686 YOR055WYOR055W 435 nt2.04□□□□□ -2.08
NUP42P49686 PIK1YNL267W 3201 nt2.03□□□□□ -2.08
NUP42P49686 NUP188YML103C 4968 nt2.02□□□□□ -2.09
NUP42P49686 tD(GUC)QtD(GUC)Q 75 nt2.01□□□□□ -2.09
NUP42P49686 MBB1YJL199C 327 nt2.01□□□□□ -2.09
NUP42P49686 EST2YLR318W 2655 nt2.01□□□□□ -2.09
NUP42P49686 SXM1YDR395W 2835 nt2□□□□□ -2.09
NUP42P49686 YDR098C-BYDR098C-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YDR210C-DYDR210C-D 5268 nt1.99□□□□□ -2.09
NUP42P49686 YDR316W-BYDR316W-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YDR365W-BYDR365W-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YER138CYER138C 5268 nt1.99□□□□□ -2.09
NUP42P49686 YER160CYER160C 5268 nt1.99□□□□□ -2.09
NUP42P49686 YGR038C-BYGR038C-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YGR161C-DYGR161C-D 5268 nt1.99□□□□□ -2.09
NUP42P49686 YJR027WYJR027W 5268 nt1.99□□□□□ -2.09
NUP42P49686 YLR157C-BYLR157C-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YML039WYML039W 5268 nt1.99□□□□□ -2.09
NUP42P49686 YML045WYML045W 5268 nt1.99□□□□□ -2.09
NUP42P49686 YMR050CYMR050C 5268 nt1.99□□□□□ -2.09
NUP42P49686 YOL103W-BYOL103W-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YBR012W-BYBR012W-B 5271 nt1.99□□□□□ -2.09
NUP42P49686 YOR142W-BYOR142W-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YPL257W-BYPL257W-B 5268 nt1.99□□□□□ -2.09
NUP42P49686 YPR158W-BYPR158W-B 5271 nt1.99□□□□□ -2.09
NUP42P49686 TFC3YAL001C 3483 nt1.99□□□□□ -2.09
NUP42P49686 PMD1YER132C 5262 nt1.99□□□□□ -2.09
NUP42P49686 ARP8YOR141C 2646 nt1.98□□□□□ -2.09
NUP42P49686 snR53snR53 91 nt1.98□□□□□ -2.09
NUP42P49686 RIF1YBR275C 5751 nt1.98□□□□□ -2.09
NUP42P49686 MSB1YOR188W 3414 nt1.97□□□□□ -2.09
NUP42P49686 IRC20YLR247C 4671 nt1.96□□□□□ -2.1
NUP42P49686 YBL005W-BYBL005W-B 5268 nt1.95□□□□□ -2.1
NUP42P49686 PDR1YGL013C 3207 nt1.94□□□□□ -2.1
NUP42P49686 YLR299C-AYLR299C-A 93 nt1.94□□□□□ -2.1
NUP42P49686 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
NUP42P49686 CFT1YDR301W 4074 nt1.93□□□□□ -2.1
NUP42P49686 TRM732YMR259C 4263 nt1.91□□□□□ -2.1
NUP42P49686 snR64snR64 101 nt1.9□□□□□ -2.11
NUP42P49686 HUG1YML058W-A 207 nt1.9□□□□□ -2.11
NUP42P49686 MSH3YCR092C 3057 nt1.89□□□□□ -2.11
NUP42P49686 ORC3YLL004W 1851 nt1.89□□□□□ -2.11
NUP42P49686 snR69snR69 101 nt1.89□□□□□ -2.11
NUP42P49686 EST1YLR233C 2100 nt1.89□□□□□ -2.11
NUP42P49686 NEO1YIL048W 3456 nt1.89□□□□□ -2.11
NUP42P49686 CSE1YGL238W 2883 nt1.87□□□□□ -2.11
NUP42P49686 YDL159C-BYDL159C-B 177 nt1.87□□□□□ -2.11
NUP42P49686 tT(UGU)HtT(UGU)H 72 nt1.87□□□□□ -2.11
NUP42P49686 SPP41YDR464W 4308 nt1.86□□□□□ -2.11
NUP42P49686 SCD5YOR329C 2619 nt1.85□□□□□ -2.11
NUP42P49686 CDC39YCR093W 6327 nt1.85□□□□□ -2.11
NUP42P49686 RDS3YPR094W 324 nt1.85□□□□□ -2.11
NUP42P49686 YJL077W-AYJL077W-A 87 nt1.81□□□□□ -2.12
NUP42P49686 NUP170YBL079W 4509 nt1.81□□□□□ -2.12
NUP42P49686 DNF1YER166W 4716 nt1.81□□□□□ -2.12
NUP42P49686 YLL006W-AYLL006W-A 177 nt1.8□□□□□ -2.12
NUP42P49686 snR50snR50 90 nt1.8□□□□□ -2.12
NUP42P49686 BRR2YER172C 6492 nt1.8□□□□□ -2.12
NUP42P49686 PET127YOR017W 2403 nt1.79□□□□□ -2.12
NUP42P49686 PEP1YBL017C 4740 nt1.78□□□□□ -2.12
NUP42P49686 snR70snR70 164 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)G1tW(CCA)G1 72 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)G2tW(CCA)G2 72 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)JtW(CCA)J 72 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)KtW(CCA)K 72 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)MtW(CCA)M 72 nt1.78□□□□□ -2.12
NUP42P49686 tW(CCA)PtW(CCA)P 72 nt1.78□□□□□ -2.12
NUP42P49686 FKS3YMR306W 5358 nt1.77□□□□□ -2.13
NUP42P49686 FKS1YLR342W 5631 nt1.76□□□□□ -2.13
NUP42P49686 SIP4YJL089W 2490 nt1.76□□□□□ -2.13
NUP42P49686 VPS15YBR097W 4365 nt1.75□□□□□ -2.13
NUP42P49686 YHR180C-BYHR180C-B 105 nt1.74□□□□□ -2.13
NUP42P49686 YGR130CYGR130C 2451 nt1.74□□□□□ -2.13
NUP42P49686 YKL225WYKL225W 348 nt1.73□□□□□ -2.13
NUP42P49686 REV3YPL167C 4515 nt1.73□□□□□ -2.13
NUP42P49686 NIP1YMR309C 2439 nt1.72□□□□□ -2.13
NUP42P49686 BUL2YML111W 2763 nt1.71□□□□□ -2.14
NUP42P49686 FYV8YGR196C 2454 nt1.71□□□□□ -2.14
NUP42P49686 SPT7YBR081C 3999 nt1.68□□□□□ -2.14
NUP42P49686 NST1YNL091W 3723 nt1.68□□□□□ -2.14
NUP42P49686 LAA1YJL207C 6045 nt1.68□□□□□ -2.14
NUP42P49686 BRE1YDL074C 2103 nt1.67□□□□□ -2.14
NUP42P49686 RPL41AYDL184C 78 nt1.67□□□□□ -2.14
NUP42P49686 CAT8YMR280C 4302 nt1.67□□□□□ -2.14
NUP42P49686 PAU12YGR294W 363 nt1.66□□□□□ -2.14
NUP42P49686 YML054C-AYML054C-A 159 nt1.66□□□□□ -2.14
NUP42P49686 DGR1YNL130C-A 147 nt1.66□□□□□ -2.14
NUP42P49686 tQ(UUG)QtQ(UUG)Q 76 nt1.63□□□□□ -2.15
NUP42P49686 YBR296C-AYBR296C-A 120 nt1.63□□□□□ -2.15
NUP42P49686 SSK2YNR031C 4740 nt1.63□□□□□ -2.15
NUP42P49686 YPL060C-AYPL060C-A 3315 nt1.61□□□□□ -2.15
NUP42P49686 YBR109W-AYBR109W-A 225 nt1.61□□□□□ -2.15
NUP42P49686 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
NUP42P49686 FAB1YFR019W 6837 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms