Protein–RNA interactions for Protein: P33299

RPT1, 26S proteasome regulatory subunit 7 homolog, yeastyeast

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT1P33299 SEC8YPR055W 3198 nt1.71□□□□□ -2.13
RPT1P33299 NUP188YML103C 4968 nt1.71□□□□□ -2.14
RPT1P33299 YLR232WYLR232W 348 nt1.71□□□□□ -2.14
RPT1P33299 BPH1YCR032W 6504 nt1.71□□□□□ -2.14
RPT1P33299 SXM1YDR395W 2835 nt1.7□□□□□ -2.14
RPT1P33299 MSH3YCR092C 3057 nt1.7□□□□□ -2.14
RPT1P33299 YBR099CYBR099C 384 nt1.69□□□□□ -2.14
RPT1P33299 QCR9YGR183C 201 nt1.68□□□□□ -2.14
RPT1P33299 KAP120YPL125W 3099 nt1.68□□□□□ -2.14
RPT1P33299 GEA2YEL022W 4380 nt1.67□□□□□ -2.14
RPT1P33299 SOM1YEL059C-A 225 nt1.67□□□□□ -2.14
RPT1P33299 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
RPT1P33299 PMD1YER132C 5262 nt1.66□□□□□ -2.14
RPT1P33299 DNF3YMR162C 4971 nt1.65□□□□□ -2.15
RPT1P33299 PRP16YKR086W 3216 nt1.65□□□□□ -2.15
RPT1P33299 tM(CAU)Q2tM(CAU)Q2 78 nt1.64□□□□□ -2.15
RPT1P33299 STF2YGR008C 255 nt1.64□□□□□ -2.15
RPT1P33299 YLR399W-AYLR399W-A 105 nt1.64□□□□□ -2.15
RPT1P33299 CDC39YCR093W 6327 nt1.64□□□□□ -2.15
RPT1P33299 YIL071W-AYIL071W-A 477 nt1.63□□□□□ -2.15
RPT1P33299 YHR131W-AYHR131W-A 246 nt1.62□□□□□ -2.15
RPT1P33299 CCH1YGR217W 6120 nt1.62□□□□□ -2.15
RPT1P33299 snR39BsnR39B 96 nt1.61□□□□□ -2.15
RPT1P33299 LAA1YJL207C 6045 nt1.6□□□□□ -2.15
RPT1P33299 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
RPT1P33299 YPR160W-AYPR160W-A 81 nt1.59□□□□□ -2.15
RPT1P33299 YDR524C-AYDR524C-A 120 nt1.56□□□□□ -2.16
RPT1P33299 YBR178WYBR178W 375 nt1.56□□□□□ -2.16
RPT1P33299 YSP1YHR155W 3687 nt1.55□□□□□ -2.16
RPT1P33299 YDR544CYDR544C 429 nt1.54□□□□□ -2.16
RPT1P33299 PMP2YEL017C-A 132 nt1.54□□□□□ -2.16
RPT1P33299 BEM3YPL115C 3387 nt1.53□□□□□ -2.16
RPT1P33299 YGR146C-AYGR146C-A 162 nt1.52□□□□□ -2.17
RPT1P33299 COG6YNL041C 2520 nt1.52□□□□□ -2.17
RPT1P33299 PIK1YNL267W 3201 nt1.52□□□□□ -2.17
RPT1P33299 FIG2YCR089W 4830 nt1.52□□□□□ -2.17
RPT1P33299 SPC110YDR356W 2835 nt1.52□□□□□ -2.17
RPT1P33299 TFB5YDR079C-A 219 nt1.51□□□□□ -2.17
RPT1P33299 YMR326CYMR326C 309 nt1.51□□□□□ -2.17
RPT1P33299 YGR130CYGR130C 2451 nt1.51□□□□□ -2.17
RPT1P33299 PET127YOR017W 2403 nt1.51□□□□□ -2.17
RPT1P33299 SSK2YNR031C 4740 nt1.51□□□□□ -2.17
RPT1P33299 snR61snR61 90 nt1.5□□□□□ -2.17
RPT1P33299 YJL127W-AYJL127W-A 117 nt1.5□□□□□ -2.17
RPT1P33299 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
RPT1P33299 YDR210WYDR210W 228 nt1.49□□□□□ -2.17
RPT1P33299 YNL103W-AYNL103W-A 90 nt1.49□□□□□ -2.17
RPT1P33299 tN(GUU)QtN(GUU)Q 71 nt1.48□□□□□ -2.17
RPT1P33299 IML1YJR138W 4755 nt1.47□□□□□ -2.17
RPT1P33299 YDL073WYDL073W 2955 nt1.46□□□□□ -2.18
RPT1P33299 UBP3YER151C 2739 nt1.46□□□□□ -2.18
RPT1P33299 YBL109WYBL109W 336 nt1.45□□□□□ -2.18
RPT1P33299 ULP2YIL031W 3105 nt1.44□□□□□ -2.18
RPT1P33299 HUG1YML058W-A 207 nt1.44□□□□□ -2.18
RPT1P33299 SEC1YDR164C 2175 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)E1tH(GUG)E1 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)E2tH(GUG)E2 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)G1tH(GUG)G1 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)G2tH(GUG)G2 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)HtH(GUG)H 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)KtH(GUG)K 72 nt1.42□□□□□ -2.18
RPT1P33299 tH(GUG)MtH(GUG)M 72 nt1.42□□□□□ -2.18
RPT1P33299 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
RPT1P33299 GLG1YKR058W 1851 nt1.41□□□□□ -2.18
RPT1P33299 BIR1YJR089W 2865 nt1.41□□□□□ -2.18
RPT1P33299 SBH1YER087C-B 249 nt1.4□□□□□ -2.19
RPT1P33299 YHR217CYHR217C 462 nt1.38□□□□□ -2.19
RPT1P33299 YBR072C-AYBR072C-A 162 nt1.36□□□□□ -2.19
RPT1P33299 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
RPT1P33299 SPT7YBR081C 3999 nt1.33□□□□□ -2.2
RPT1P33299 YNL266WYNL266W 420 nt1.33□□□□□ -2.2
RPT1P33299 NST1YNL091W 3723 nt1.32□□□□□ -2.2
RPT1P33299 LTE1YAL024C 4308 nt1.3□□□□□ -2.2
RPT1P33299 RCO1YMR075W 2055 nt1.3□□□□□ -2.2
RPT1P33299 SCC2YDR180W 4482 nt1.29□□□□□ -2.2
RPT1P33299 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
RPT1P33299 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
RPT1P33299 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
RPT1P33299 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
RPT1P33299 YGL041C-BYGL041C-B 183 nt1.27□□□□□ -2.21
RPT1P33299 NNF2YGR089W 2811 nt1.25□□□□□ -2.21
RPT1P33299 YLL006W-AYLL006W-A 177 nt1.23□□□□□ -2.21
RPT1P33299 YPL060C-AYPL060C-A 3315 nt1.19□□□□□ -2.22
RPT1P33299 SEC10YLR166C 2616 nt1.19□□□□□ -2.22
RPT1P33299 YDL247W-AYDL247W-A 75 nt1.17□□□□□ -2.22
RPT1P33299 YAL037C-AYAL037C-A 93 nt1.17□□□□□ -2.22
RPT1P33299 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.22
RPT1P33299 YBR196C-AYBR196C-A 150 nt1.15□□□□□ -2.23
RPT1P33299 CSE1YGL238W 2883 nt1.12□□□□□ -2.23
RPT1P33299 snR81snR81 201 nt1.12□□□□□ -2.23
RPT1P33299 BUL2YML111W 2763 nt1.12□□□□□ -2.23
RPT1P33299 RKR1YMR247C 4689 nt1.11□□□□□ -2.23
RPT1P33299 NIP1YMR309C 2439 nt1.1□□□□□ -2.23
RPT1P33299 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
RPT1P33299 snR69snR69 101 nt1.05□□□□□ -2.24
RPT1P33299 tD(GUC)QtD(GUC)Q 75 nt1.05□□□□□ -2.24
RPT1P33299 YJL077W-AYJL077W-A 87 nt1.05□□□□□ -2.24
RPT1P33299 DOP1YDR141C 5097 nt1.05□□□□□ -2.24
RPT1P33299 EST1YLR233C 2100 nt1.04□□□□□ -2.24
RPT1P33299 PET111YMR257C 2403 nt1.04□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms