Protein–RNA interactions for Protein: P25043

PUP1, Proteasome subunit beta type-2, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUP1P25043 UTP22YGR090W 3714 nt1.9□□□□□ -2.11
PUP1P25043 YLR419WYLR419W 4308 nt1.9□□□□□ -2.11
PUP1P25043 BRE1YDL074C 2103 nt1.89□□□□□ -2.11
PUP1P25043 DNA2YHR164C 4569 nt1.89□□□□□ -2.11
PUP1P25043 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
PUP1P25043 ASE1YOR058C 2658 nt1.87□□□□□ -2.11
PUP1P25043 YGL041C-BYGL041C-B 183 nt1.87□□□□□ -2.11
PUP1P25043 BEM3YPL115C 3387 nt1.87□□□□□ -2.11
PUP1P25043 PRP16YKR086W 3216 nt1.86□□□□□ -2.11
PUP1P25043 YGR146C-AYGR146C-A 162 nt1.86□□□□□ -2.11
PUP1P25043 YLR399W-AYLR399W-A 105 nt1.86□□□□□ -2.11
PUP1P25043 NUP157YER105C 4176 nt1.86□□□□□ -2.11
PUP1P25043 YHR214C-BYHR214C-B 5382 nt1.86□□□□□ -2.11
PUP1P25043 REV3YPL167C 4515 nt1.85□□□□□ -2.11
PUP1P25043 KAP120YPL125W 3099 nt1.85□□□□□ -2.11
PUP1P25043 NUP188YML103C 4968 nt1.85□□□□□ -2.11
PUP1P25043 SXM1YDR395W 2835 nt1.84□□□□□ -2.12
PUP1P25043 YDR210WYDR210W 228 nt1.83□□□□□ -2.12
PUP1P25043 COG6YNL041C 2520 nt1.83□□□□□ -2.12
PUP1P25043 PMD1YER132C 5262 nt1.81□□□□□ -2.12
PUP1P25043 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
PUP1P25043 CFT1YDR301W 4074 nt1.8□□□□□ -2.12
PUP1P25043 YSP1YHR155W 3687 nt1.78□□□□□ -2.12
PUP1P25043 BIR1YJR089W 2865 nt1.78□□□□□ -2.12
PUP1P25043 TRM732YMR259C 4263 nt1.77□□□□□ -2.13
PUP1P25043 YPR160W-AYPR160W-A 81 nt1.77□□□□□ -2.13
PUP1P25043 BRR2YER172C 6492 nt1.77□□□□□ -2.13
PUP1P25043 FKS1YLR342W 5631 nt1.77□□□□□ -2.13
PUP1P25043 YDL073WYDL073W 2955 nt1.77□□□□□ -2.13
PUP1P25043 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
PUP1P25043 SEC1YDR164C 2175 nt1.75□□□□□ -2.13
PUP1P25043 NEO1YIL048W 3456 nt1.75□□□□□ -2.13
PUP1P25043 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
PUP1P25043 YNL266WYNL266W 420 nt1.74□□□□□ -2.13
PUP1P25043 PEP1YBL017C 4740 nt1.72□□□□□ -2.13
PUP1P25043 RCO1YMR075W 2055 nt1.71□□□□□ -2.14
PUP1P25043 UBP3YER151C 2739 nt1.7□□□□□ -2.14
PUP1P25043 IRC20YLR247C 4671 nt1.7□□□□□ -2.14
PUP1P25043 DNF3YMR162C 4971 nt1.69□□□□□ -2.14
PUP1P25043 tN(GUU)QtN(GUU)Q 71 nt1.68□□□□□ -2.14
PUP1P25043 GLG1YKR058W 1851 nt1.67□□□□□ -2.14
PUP1P25043 ULP2YIL031W 3105 nt1.66□□□□□ -2.14
PUP1P25043 YBR072C-AYBR072C-A 162 nt1.66□□□□□ -2.14
PUP1P25043 CDC39YCR093W 6327 nt1.66□□□□□ -2.14
PUP1P25043 YAL037C-AYAL037C-A 93 nt1.64□□□□□ -2.15
PUP1P25043 VPS15YBR097W 4365 nt1.63□□□□□ -2.15
PUP1P25043 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
PUP1P25043 snR81snR81 201 nt1.59□□□□□ -2.15
PUP1P25043 YMR272W-BYMR272W-B 108 nt1.59□□□□□ -2.15
PUP1P25043 tS(GCU)Q1tS(GCU)Q1 86 nt1.57□□□□□ -2.16
PUP1P25043 YBR196C-AYBR196C-A 150 nt1.56□□□□□ -2.16
PUP1P25043 YIL142C-AYIL142C-A 333 nt1.53□□□□□ -2.16
PUP1P25043 SEC10YLR166C 2616 nt1.52□□□□□ -2.17
PUP1P25043 FAB1YFR019W 6837 nt1.52□□□□□ -2.17
PUP1P25043 YGR130CYGR130C 2451 nt1.51□□□□□ -2.17
PUP1P25043 SPC110YDR356W 2835 nt1.51□□□□□ -2.17
PUP1P25043 NNF2YGR089W 2811 nt1.51□□□□□ -2.17
PUP1P25043 SSK2YNR031C 4740 nt1.51□□□□□ -2.17
PUP1P25043 SPT7YBR081C 3999 nt1.49□□□□□ -2.17
PUP1P25043 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
PUP1P25043 MSH3YCR092C 3057 nt1.48□□□□□ -2.17
PUP1P25043 PIK1YNL267W 3201 nt1.47□□□□□ -2.17
PUP1P25043 YOL083C-AYOL083C-A 141 nt1.46□□□□□ -2.18
PUP1P25043 YLL006W-AYLL006W-A 177 nt1.45□□□□□ -2.18
PUP1P25043 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
PUP1P25043 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
PUP1P25043 ANS1YHR126C 480 nt1.42□□□□□ -2.18
PUP1P25043 YLL066W-BYLL066W-B 171 nt1.42□□□□□ -2.18
PUP1P25043 HUG1YML058W-A 207 nt1.42□□□□□ -2.18
PUP1P25043 CSE1YGL238W 2883 nt1.41□□□□□ -2.18
PUP1P25043 snR62snR62 100 nt1.41□□□□□ -2.18
PUP1P25043 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
PUP1P25043 YBL100W-CYBL100W-C 120 nt1.41□□□□□ -2.18
PUP1P25043 MEC1YBR136W 7107 nt1.4□□□□□ -2.18
PUP1P25043 PET127YOR017W 2403 nt1.4□□□□□ -2.18
PUP1P25043 LTE1YAL024C 4308 nt1.4□□□□□ -2.19
PUP1P25043 IRA1YBR140C 9279 nt1.39□□□□□ -2.19
PUP1P25043 SCC2YDR180W 4482 nt1.39□□□□□ -2.19
PUP1P25043 tD(GUC)QtD(GUC)Q 75 nt1.37□□□□□ -2.19
PUP1P25043 YBL071C-BYBL071C-B 99 nt1.37□□□□□ -2.19
PUP1P25043 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
PUP1P25043 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
PUP1P25043 snR45snR45 172 nt1.35□□□□□ -2.19
PUP1P25043 YLR286W-AYLR286W-A 135 nt1.34□□□□□ -2.19
PUP1P25043 snR69snR69 101 nt1.33□□□□□ -2.2
PUP1P25043 RPS26AYGL189C 360 nt1.33□□□□□ -2.2
PUP1P25043 YJL077W-AYJL077W-A 87 nt1.33□□□□□ -2.2
PUP1P25043 EST1YLR233C 2100 nt1.31□□□□□ -2.2
PUP1P25043 NST1YNL091W 3723 nt1.3□□□□□ -2.2
PUP1P25043 YPR117WYPR117W 7470 nt1.3□□□□□ -2.2
PUP1P25043 NIP1YMR309C 2439 nt1.29□□□□□ -2.2
PUP1P25043 SIP4YJL089W 2490 nt1.28□□□□□ -2.2
PUP1P25043 RDS3YPR094W 324 nt1.28□□□□□ -2.2
PUP1P25043 YOL164W-AYOL164W-A 183 nt1.27□□□□□ -2.21
PUP1P25043 BUL2YML111W 2763 nt1.25□□□□□ -2.21
PUP1P25043 YLR299C-AYLR299C-A 93 nt1.24□□□□□ -2.21
PUP1P25043 YPL060C-AYPL060C-A 3315 nt1.23□□□□□ -2.21
PUP1P25043 YGR240C-AYGR240C-A 201 nt1.23□□□□□ -2.21
PUP1P25043 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
PUP1P25043 YDL159C-BYDL159C-B 177 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms