Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.96■■□□□ 1.11
TPM1P09493 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.96■■□□□ 1.11
TPM1P09493 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM1P09493 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.96■■□□□ 1.11
TPM1P09493 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM1P09493 CCDC92B-201ENST00000575506 885 ntBASIC21.96■■□□□ 1.11
TPM1P09493 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM1P09493 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.96■■□□□ 1.11
TPM1P09493 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.96■■□□□ 1.11
TPM1P09493 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TPM1P09493 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TPM1P09493 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
TPM1P09493 BX119927.1-201ENST00000636596 1552 ntBASIC21.95■■□□□ 1.11
TPM1P09493 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
TPM1P09493 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TPM1P09493 AC105265.2-201ENST00000467189 838 ntBASIC21.95■■□□□ 1.1
TPM1P09493 AP001160.3-201ENST00000601484 763 ntBASIC21.95■■□□□ 1.1
TPM1P09493 AL031432.3-201ENST00000607698 485 ntBASIC21.95■■□□□ 1.1
TPM1P09493 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.95■■□□□ 1.1
TPM1P09493 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TPM1P09493 AL691432.2-201ENST00000607222 2038 ntBASIC21.95■■□□□ 1.1
TPM1P09493 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TPM1P09493 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.95■■□□□ 1.1
TPM1P09493 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TPM1P09493 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.95■■□□□ 1.1
TPM1P09493 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.94■■□□□ 1.1
TPM1P09493 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.94■■□□□ 1.1
TPM1P09493 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.94■■□□□ 1.1
TPM1P09493 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 KRT18P20-201ENST00000548986 1279 ntBASIC21.94■■□□□ 1.1
TPM1P09493 AC104187.1-201ENST00000607510 612 ntBASIC21.94■■□□□ 1.1
TPM1P09493 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.94■■□□□ 1.1
TPM1P09493 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TPM1P09493 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.94■■□□□ 1.1
TPM1P09493 AP000974.1-201ENST00000623909 2387 ntBASIC21.94■■□□□ 1.1
TPM1P09493 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.93■■□□□ 1.1
TPM1P09493 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TPM1P09493 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TPM1P09493 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TPM1P09493 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.93■■□□□ 1.1
TPM1P09493 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.93■■□□□ 1.1
TPM1P09493 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TPM1P09493 AC243732.1-201ENST00000612648 864 ntBASIC21.93■■□□□ 1.1
TPM1P09493 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.93■■□□□ 1.1
TPM1P09493 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TPM1P09493 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
TPM1P09493 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.92■■□□□ 1.1
TPM1P09493 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.92■■□□□ 1.1
TPM1P09493 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.92■■□□□ 1.1
TPM1P09493 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TPM1P09493 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.92■■□□□ 1.1
TPM1P09493 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.92■■□□□ 1.1
TPM1P09493 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TPM1P09493 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms