Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP2P08253 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP2P08253 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP2P08253 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP2P08253 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP2P08253 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP2P08253 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP2P08253 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.17■□□□□ 0.82
MMP2P08253 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP2P08253 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 KRT16P6-202ENST00000425692 1426 ntBASIC20.17■□□□□ 0.82
MMP2P08253 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP2P08253 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP2P08253 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
MMP2P08253 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP2P08253 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP2P08253 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP2P08253 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.16■□□□□ 0.82
MMP2P08253 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MMP2P08253 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
MMP2P08253 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP2P08253 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP2P08253 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP2P08253 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP2P08253 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MMP2P08253 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
MMP2P08253 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP2P08253 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP2P08253 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP2P08253 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP2P08253 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.15■□□□□ 0.82
MMP2P08253 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP2P08253 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP2P08253 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.15■□□□□ 0.82
MMP2P08253 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP2P08253 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP2P08253 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MMP2P08253 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP2P08253 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP2P08253 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.14■□□□□ 0.81
MMP2P08253 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.14■□□□□ 0.81
MMP2P08253 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP2P08253 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
MMP2P08253 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP2P08253 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP2P08253 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MMP2P08253 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP2P08253 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP2P08253 AL390719.1-204ENST00000412397 1219 ntBASIC20.13■□□□□ 0.81
MMP2P08253 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP2P08253 KRT18P6-201ENST00000555540 1265 ntBASIC20.13■□□□□ 0.81
MMP2P08253 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP2P08253 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP2P08253 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms