Protein–RNA interactions for Protein: P08118

MSMB, Beta-microseminoprotein, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSMBP08118 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.39■□□□□ 0.21
MSMBP08118 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.39■□□□□ 0.21
MSMBP08118 MIR1224-201ENST00000408193 85 ntBASIC16.39■□□□□ 0.21
MSMBP08118 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 KRT18P21-201ENST00000515767 1272 ntBASIC16.39■□□□□ 0.21
MSMBP08118 AL353708.3-201ENST00000610272 989 ntBASIC16.39■□□□□ 0.21
MSMBP08118 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.39■□□□□ 0.21
MSMBP08118 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.39■□□□□ 0.21
MSMBP08118 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 FP700111.2-201ENST00000619190 1892 ntBASIC16.39■□□□□ 0.21
MSMBP08118 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MSMBP08118 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.39■□□□□ 0.21
MSMBP08118 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.39■□□□□ 0.21
MSMBP08118 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MSMBP08118 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.38■□□□□ 0.21
MSMBP08118 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MSMBP08118 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.38■□□□□ 0.21
MSMBP08118 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.38■□□□□ 0.21
MSMBP08118 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.38■□□□□ 0.21
MSMBP08118 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.38■□□□□ 0.21
MSMBP08118 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.38■□□□□ 0.21
MSMBP08118 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MSMBP08118 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.38■□□□□ 0.21
MSMBP08118 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSMBP08118 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.37■□□□□ 0.21
MSMBP08118 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.37■□□□□ 0.21
MSMBP08118 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.37■□□□□ 0.21
MSMBP08118 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MSMBP08118 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 MMP23A-201ENST00000234610 1017 ntBASIC16.37■□□□□ 0.21
MSMBP08118 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 NUDT16P1-203ENST00000513809 620 ntBASIC16.37■□□□□ 0.21
MSMBP08118 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
MSMBP08118 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.37■□□□□ 0.21
MSMBP08118 AC097493.4-201ENST00000641197 219 ntBASIC16.37■□□□□ 0.21
MSMBP08118 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MSMBP08118 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSMBP08118 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.36■□□□□ 0.21
MSMBP08118 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.36■□□□□ 0.21
MSMBP08118 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.36■□□□□ 0.21
MSMBP08118 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.36■□□□□ 0.21
MSMBP08118 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.36■□□□□ 0.21
MSMBP08118 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSMBP08118 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.36■□□□□ 0.21
MSMBP08118 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MSMBP08118 AF106564.1-201ENST00000607058 2553 ntBASIC16.35■□□□□ 0.21
MSMBP08118 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSMBP08118 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.35■□□□□ 0.21
MSMBP08118 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.35■□□□□ 0.21
MSMBP08118 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.35■□□□□ 0.21
MSMBP08118 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSMBP08118 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSMBP08118 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MSMBP08118 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MSMBP08118 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSMBP08118 DPP3P2-201ENST00000416030 1696 ntBASIC16.35■□□□□ 0.21
MSMBP08118 AC006128.1-201ENST00000624704 1661 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms