Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DQB2P05538 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DQB2P05538 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DQB2P05538 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 KRT16P6-202ENST00000425692 1426 ntBASIC20.28■□□□□ 0.84
HLA-DQB2P05538 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 SLC25A24-204ENST00000569674 2357 ntBASIC20.28■□□□□ 0.84
HLA-DQB2P05538 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 AC005829.2-201ENST00000571422 1056 ntBASIC20.28■□□□□ 0.84
HLA-DQB2P05538 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 HLA-B-256ENST00000639848 1089 ntBASIC20.28■□□□□ 0.84
HLA-DQB2P05538 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-DQB2P05538 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 AC092368.3-202ENST00000574180 1591 ntBASIC20.27■□□□□ 0.84
HLA-DQB2P05538 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 AC060766.5-201ENST00000590539 871 ntBASIC20.27■□□□□ 0.84
HLA-DQB2P05538 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HLA-DQB2P05538 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HLA-DQB2P05538 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms