Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HERC2O95714 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.51□□□□□ -0.41
HERC2O95714 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.51□□□□□ -0.41
HERC2O95714 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.51□□□□□ -0.41
HERC2O95714 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
HERC2O95714 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HERC2O95714 AL023803.3-201ENST00000615559 522 ntBASIC12.51□□□□□ -0.41
HERC2O95714 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 AC016734.2-201ENST00000624325 1377 ntBASIC12.51□□□□□ -0.41
HERC2O95714 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.51□□□□□ -0.41
HERC2O95714 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.51□□□□□ -0.41
HERC2O95714 TSSC2-201ENST00000450217 709 ntBASIC12.51□□□□□ -0.41
HERC2O95714 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.51□□□□□ -0.41
HERC2O95714 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.51□□□□□ -0.41
HERC2O95714 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HERC2O95714 AC096733.2-201ENST00000609937 1394 ntBASIC12.51□□□□□ -0.41
HERC2O95714 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.5□□□□□ -0.41
HERC2O95714 AC104819.1-201ENST00000504587 486 ntBASIC12.5□□□□□ -0.41
HERC2O95714 AC012615.1-201ENST00000565797 1299 ntBASIC12.5□□□□□ -0.41
HERC2O95714 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 MIR1199-201ENST00000621445 119 ntBASIC12.5□□□□□ -0.41
HERC2O95714 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HERC2O95714 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.5□□□□□ -0.41
HERC2O95714 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.5□□□□□ -0.41
HERC2O95714 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 AC092364.2-202ENST00000597012 1073 ntBASIC12.5□□□□□ -0.41
HERC2O95714 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.5□□□□□ -0.41
HERC2O95714 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HERC2O95714 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.5□□□□□ -0.41
HERC2O95714 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.49□□□□□ -0.41
HERC2O95714 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 HLA-G-202ENST00000376815 851 ntBASIC12.49□□□□□ -0.41
HERC2O95714 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.49□□□□□ -0.41
HERC2O95714 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.49□□□□□ -0.41
HERC2O95714 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.49□□□□□ -0.41
HERC2O95714 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
HERC2O95714 AC142086.6-201ENST00000621154 1765 ntBASIC12.49□□□□□ -0.41
HERC2O95714 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HERC2O95714 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
HERC2O95714 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
HERC2O95714 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.49□□□□□ -0.41
HERC2O95714 FOSL1P1-201ENST00000511041 816 ntBASIC12.49□□□□□ -0.41
HERC2O95714 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.49□□□□□ -0.41
HERC2O95714 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HERC2O95714 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.48□□□□□ -0.41
HERC2O95714 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HERC2O95714 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HERC2O95714 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HERC2O95714 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.48□□□□□ -0.41
HERC2O95714 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HERC2O95714 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
HERC2O95714 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC12.48□□□□□ -0.41
HERC2O95714 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HERC2O95714 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.48□□□□□ -0.41
HERC2O95714 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HERC2O95714 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.48□□□□□ -0.41
HERC2O95714 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.48□□□□□ -0.41
HERC2O95714 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.48□□□□□ -0.41
HERC2O95714 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms