Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC116050.2-201ENST00000612102 1779 ntBASIC15.52■□□□□ 0.07
ZNF253O75346 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF253O75346 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.51■□□□□ 0.07
ZNF253O75346 AC010141.2-201ENST00000452426 721 ntBASIC15.51■□□□□ 0.07
ZNF253O75346 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF253O75346 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 AL031432.3-201ENST00000607698 485 ntBASIC15.51■□□□□ 0.07
ZNF253O75346 AC110285.6-201ENST00000617652 491 ntBASIC15.51■□□□□ 0.07
ZNF253O75346 MIR2861-201ENST00000636310 90 ntBASIC15.51■□□□□ 0.07
ZNF253O75346 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ZNF253O75346 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ZNF253O75346 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF253O75346 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF253O75346 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ZNF253O75346 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF253O75346 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF253O75346 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF253O75346 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ZNF253O75346 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.5■□□□□ 0.07
ZNF253O75346 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.5■□□□□ 0.07
ZNF253O75346 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF253O75346 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF253O75346 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.5■□□□□ 0.07
ZNF253O75346 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF253O75346 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
ZNF253O75346 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZNF253O75346 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
ZNF253O75346 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ZNF253O75346 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF253O75346 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
ZNF253O75346 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF253O75346 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
ZNF253O75346 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF253O75346 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF253O75346 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF253O75346 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF253O75346 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF253O75346 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF253O75346 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF253O75346 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 AC005082.1-201ENST00000413042 2259 ntBASIC15.48■□□□□ 0.07
ZNF253O75346 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF253O75346 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ZNF253O75346 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.48■□□□□ 0.07
ZNF253O75346 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF253O75346 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms