Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PFDN1O60925 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PFDN1O60925 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PFDN1O60925 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PFDN1O60925 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PFDN1O60925 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PFDN1O60925 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PFDN1O60925 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 HLA-V-202ENST00000446817 847 ntBASIC17.92■□□□□ 0.46
PFDN1O60925 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.92■□□□□ 0.46
PFDN1O60925 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.92■□□□□ 0.46
PFDN1O60925 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.92■□□□□ 0.46
PFDN1O60925 AL391005.1-201ENST00000623953 2435 ntBASIC17.92■□□□□ 0.46
PFDN1O60925 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PFDN1O60925 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 AC084018.2-201ENST00000613093 2607 ntBASIC17.92■□□□□ 0.46
PFDN1O60925 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PFDN1O60925 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PFDN1O60925 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 KRT18P10-201ENST00000388836 1287 ntBASIC17.91■□□□□ 0.46
PFDN1O60925 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PFDN1O60925 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.91■□□□□ 0.46
PFDN1O60925 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PFDN1O60925 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PFDN1O60925 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.9■□□□□ 0.46
PFDN1O60925 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PFDN1O60925 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PFDN1O60925 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PFDN1O60925 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.9■□□□□ 0.46
PFDN1O60925 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 LINC01465-201ENST00000408887 1940 ntBASIC17.9■□□□□ 0.46
PFDN1O60925 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PFDN1O60925 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.9■□□□□ 0.46
PFDN1O60925 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PFDN1O60925 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PFDN1O60925 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
PFDN1O60925 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.89■□□□□ 0.46
PFDN1O60925 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PFDN1O60925 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms