Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PLOD3O60568 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.8■□□□□ 0.6
PLOD3O60568 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 PTBP1P-201ENST00000554374 1601 ntBASIC18.8■□□□□ 0.6
PLOD3O60568 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PLOD3O60568 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PLOD3O60568 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PLOD3O60568 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PLOD3O60568 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
PLOD3O60568 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 AC099778.1-201ENST00000568593 1911 ntBASIC18.79■□□□□ 0.6
PLOD3O60568 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.79■□□□□ 0.6
PLOD3O60568 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
PLOD3O60568 GUSBP6-202ENST00000438529 1198 ntBASIC18.79■□□□□ 0.6
PLOD3O60568 TSPY6P-201ENST00000448518 926 ntBASIC18.79■□□□□ 0.6
PLOD3O60568 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.79■□□□□ 0.6
PLOD3O60568 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PLOD3O60568 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
PLOD3O60568 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
PLOD3O60568 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.78■□□□□ 0.6
PLOD3O60568 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.78■□□□□ 0.6
PLOD3O60568 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.78■□□□□ 0.6
PLOD3O60568 SLC29A4P1-201ENST00000398760 971 ntBASIC18.78■□□□□ 0.6
PLOD3O60568 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PLOD3O60568 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.78■□□□□ 0.6
PLOD3O60568 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PLOD3O60568 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.78■□□□□ 0.6
PLOD3O60568 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PLOD3O60568 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PLOD3O60568 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.78■□□□□ 0.6
PLOD3O60568 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PLOD3O60568 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.77■□□□□ 0.6
PLOD3O60568 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 AC090192.1-201ENST00000517740 490 ntBASIC18.77■□□□□ 0.6
PLOD3O60568 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.77■□□□□ 0.6
PLOD3O60568 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 AC092118.2-201ENST00000613495 667 ntBASIC18.77■□□□□ 0.6
PLOD3O60568 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PLOD3O60568 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PLOD3O60568 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PLOD3O60568 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PLOD3O60568 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PLOD3O60568 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PLOD3O60568 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PLOD3O60568 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms