Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.3■□□□□ 0.84
RIPK2O43353 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK2O43353 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.3■□□□□ 0.84
RIPK2O43353 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
RIPK2O43353 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.3■□□□□ 0.84
RIPK2O43353 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIPK2O43353 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RIPK2O43353 AC105265.2-201ENST00000467189 838 ntBASIC20.29■□□□□ 0.84
RIPK2O43353 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.29■□□□□ 0.84
RIPK2O43353 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.29■□□□□ 0.84
RIPK2O43353 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 AL032819.2-201ENST00000624543 2162 ntBASIC20.29■□□□□ 0.84
RIPK2O43353 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.29■□□□□ 0.84
RIPK2O43353 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
RIPK2O43353 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIPK2O43353 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RIPK2O43353 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RIPK2O43353 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.28■□□□□ 0.84
RIPK2O43353 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.28■□□□□ 0.84
RIPK2O43353 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK2O43353 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RIPK2O43353 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.28■□□□□ 0.84
RIPK2O43353 KRT18P20-201ENST00000548986 1279 ntBASIC20.28■□□□□ 0.84
RIPK2O43353 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.28■□□□□ 0.84
RIPK2O43353 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIPK2O43353 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK2O43353 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 NEFHP1-201ENST00000412845 2629 ntBASIC20.27■□□□□ 0.84
RIPK2O43353 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RIPK2O43353 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK2O43353 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK2O43353 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RIPK2O43353 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.27■□□□□ 0.84
RIPK2O43353 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.27■□□□□ 0.84
RIPK2O43353 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK2O43353 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RIPK2O43353 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIPK2O43353 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.27■□□□□ 0.84
RIPK2O43353 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.27■□□□□ 0.83
RIPK2O43353 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RIPK2O43353 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.26■□□□□ 0.83
RIPK2O43353 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RIPK2O43353 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.26■□□□□ 0.83
RIPK2O43353 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RIPK2O43353 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIPK2O43353 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
RIPK2O43353 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.25■□□□□ 0.83
RIPK2O43353 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RIPK2O43353 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
RIPK2O43353 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.25■□□□□ 0.83
RIPK2O43353 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms