Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MID1O15344 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MID1O15344 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.06■□□□□ 0.8
MID1O15344 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.06■□□□□ 0.8
MID1O15344 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.06■□□□□ 0.8
MID1O15344 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.06■□□□□ 0.8
MID1O15344 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.06■□□□□ 0.8
MID1O15344 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.06■□□□□ 0.8
MID1O15344 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
MID1O15344 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.06■□□□□ 0.8
MID1O15344 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MID1O15344 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.06■□□□□ 0.8
MID1O15344 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MID1O15344 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MID1O15344 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.05■□□□□ 0.8
MID1O15344 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
MID1O15344 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MID1O15344 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.05■□□□□ 0.8
MID1O15344 KRT16P5-201ENST00000455284 522 ntBASIC20.05■□□□□ 0.8
MID1O15344 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.05■□□□□ 0.8
MID1O15344 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MID1O15344 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.05■□□□□ 0.8
MID1O15344 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.05■□□□□ 0.8
MID1O15344 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.05■□□□□ 0.8
MID1O15344 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
MID1O15344 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 KRT17P2-201ENST00000300992 1314 ntBASIC20.04■□□□□ 0.8
MID1O15344 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.04■□□□□ 0.8
MID1O15344 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MID1O15344 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.04■□□□□ 0.8
MID1O15344 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 AC073912.3-201ENST00000624414 853 ntBASIC20.04■□□□□ 0.8
MID1O15344 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MID1O15344 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MID1O15344 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 HTR7P1-201ENST00000538670 1336 ntBASIC20.03■□□□□ 0.8
MID1O15344 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.03■□□□□ 0.8
MID1O15344 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MID1O15344 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MID1O15344 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.03■□□□□ 0.8
MID1O15344 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.03■□□□□ 0.8
MID1O15344 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.03■□□□□ 0.8
MID1O15344 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.03■□□□□ 0.8
MID1O15344 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.03■□□□□ 0.8
MID1O15344 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MID1O15344 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.02■□□□□ 0.8
MID1O15344 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MID1O15344 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
MID1O15344 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.02■□□□□ 0.8
MID1O15344 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.02■□□□□ 0.8
MID1O15344 MIR4785-201ENST00000585005 73 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms