Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNPHO15079 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SNPHO15079 AC010980.2-201ENST00000587099 1412 ntBASIC18.78■□□□□ 0.6
SNPHO15079 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNPHO15079 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.78■□□□□ 0.6
SNPHO15079 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SNPHO15079 AC100791.3-201ENST00000617619 330 ntBASIC18.78■□□□□ 0.6
SNPHO15079 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.78■□□□□ 0.6
SNPHO15079 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.78■□□□□ 0.6
SNPHO15079 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNPHO15079 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.78■□□□□ 0.6
SNPHO15079 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.78■□□□□ 0.6
SNPHO15079 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNPHO15079 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNPHO15079 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNPHO15079 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNPHO15079 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
SNPHO15079 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SNPHO15079 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.77■□□□□ 0.6
SNPHO15079 AL355802.2-201ENST00000402069 882 ntBASIC18.77■□□□□ 0.6
SNPHO15079 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.77■□□□□ 0.6
SNPHO15079 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.77■□□□□ 0.6
SNPHO15079 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 AC142086.2-201ENST00000569753 217 ntBASIC18.77■□□□□ 0.6
SNPHO15079 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.77■□□□□ 0.6
SNPHO15079 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.77■□□□□ 0.6
SNPHO15079 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.77■□□□□ 0.6
SNPHO15079 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SNPHO15079 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNPHO15079 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.77■□□□□ 0.6
SNPHO15079 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SNPHO15079 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNPHO15079 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.77■□□□□ 0.59
SNPHO15079 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
SNPHO15079 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.76■□□□□ 0.59
SNPHO15079 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SNPHO15079 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.76■□□□□ 0.59
SNPHO15079 AC090142.2-201ENST00000483263 416 ntBASIC18.76■□□□□ 0.59
SNPHO15079 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.76■□□□□ 0.59
SNPHO15079 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.76■□□□□ 0.59
SNPHO15079 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.76■□□□□ 0.59
SNPHO15079 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.76■□□□□ 0.59
SNPHO15079 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.76■□□□□ 0.59
SNPHO15079 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.76■□□□□ 0.59
SNPHO15079 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SNPHO15079 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNPHO15079 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.75■□□□□ 0.59
SNPHO15079 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.75■□□□□ 0.59
SNPHO15079 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.75■□□□□ 0.59
SNPHO15079 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.75■□□□□ 0.59
SNPHO15079 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SNPHO15079 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNPHO15079 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SNPHO15079 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SNPHO15079 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.75■□□□□ 0.59
SNPHO15079 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNPHO15079 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNPHO15079 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.74■□□□□ 0.59
SNPHO15079 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNPHO15079 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.74■□□□□ 0.59
SNPHO15079 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNPHO15079 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNPHO15079 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNPHO15079 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
SNPHO15079 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNPHO15079 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms