Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
HFM1A2PYH4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 PNN-205ENST00000556530 601 ntTSL 2 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC29.7■■■□□ 2.34
HFM1A2PYH4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
HFM1A2PYH4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
HFM1A2PYH4 PHGDH-210ENST00000641115 1638 ntBASIC29.7■■■□□ 2.34
HFM1A2PYH4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
HFM1A2PYH4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
HFM1A2PYH4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
HFM1A2PYH4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
HFM1A2PYH4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
HFM1A2PYH4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC29.69■■■□□ 2.34
HFM1A2PYH4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 AL596275.1-201ENST00000423464 877 ntBASIC29.68■■■□□ 2.34
HFM1A2PYH4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
HFM1A2PYH4 PRKY-204ENST00000533551 1019 ntBASIC29.68■■■□□ 2.34
HFM1A2PYH4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HFM1A2PYH4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC29.67■■■□□ 2.34
HFM1A2PYH4 TFP1-202ENST00000475455 1573 ntBASIC29.67■■■□□ 2.34
HFM1A2PYH4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
HFM1A2PYH4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HFM1A2PYH4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC29.66■■■□□ 2.34
HFM1A2PYH4 NBPF21P-201ENST00000425093 1451 ntBASIC29.65■■■□□ 2.34
HFM1A2PYH4 AC018553.1-201ENST00000616682 1458 ntBASIC29.65■■■□□ 2.34
HFM1A2PYH4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HFM1A2PYH4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 F2R-202ENST00000505600 442 ntTSL 2 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 RARRES2P10-201ENST00000564312 460 ntBASIC29.65■■■□□ 2.34
HFM1A2PYH4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HFM1A2PYH4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
HFM1A2PYH4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HFM1A2PYH4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC29.65■■■□□ 2.34
HFM1A2PYH4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.64■■■□□ 2.34
HFM1A2PYH4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC29.64■■■□□ 2.34
HFM1A2PYH4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC29.64■■■□□ 2.34
HFM1A2PYH4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC29.64■■■□□ 2.34
HFM1A2PYH4 AC233702.5-201ENST00000584107 538 ntBASIC29.64■■■□□ 2.34
HFM1A2PYH4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC29.64■■■□□ 2.34
HFM1A2PYH4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
HFM1A2PYH4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC29.64■■■□□ 2.33
HFM1A2PYH4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC29.64■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms