Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 AC019069.1-201ENST00000610008 1333 ntBASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 TCF3P1-201ENST00000423021 1937 ntBASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 AC091799.1-201ENST00000422823 811 ntBASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 SLC7A5P1-201ENST00000568957 537 ntBASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 AP000974.1-201ENST00000623909 2387 ntBASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF103-CHMP3A0A140T963 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 AC007322.3-201ENST00000426526 701 ntBASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF103-CHMP3A0A140T963 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 UBE2DNL-204ENST00000602536 740 ntBASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF103-CHMP3A0A140T963 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms