Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 AC087633.2-202ENST00000565166 1439 ntBASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 AC016405.3-201ENST00000607710 860 ntBASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-3A0A0B4J271 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 CYP21A1P-202ENST00000354927 1481 ntBASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 RARRES2P6-201ENST00000567333 442 ntBASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-3A0A0B4J271 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TRAV12-3A0A0B4J271 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 AC007322.4-201ENST00000509611 723 ntBASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 MFSD11-216ENST00000590393 1141 ntBASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 AC090340.1-201ENST00000620778 4980 ntBASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-3A0A0B4J271 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-3A0A0B4J271 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms