Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV5A0A0B4J249 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRAV5A0A0B4J249 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV5A0A0B4J249 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 AC105265.2-201ENST00000467189 838 ntBASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 RBM17P2-201ENST00000616397 1405 ntBASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV5A0A0B4J249 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV5A0A0B4J249 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms