Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC092642.1-201ENST00000392417 425 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AL139158.1-201ENST00000424719 340 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 POU5F1P5-201ENST00000445059 658 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC234771.2-201ENST00000445718 597 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 DYNLL1P1-201ENST00000595442 269 ntBASIC8.54□□□□□ -1.04
SNED1Q8TER0 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SNED1Q8TER0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.54□□□□□ -1.04
SNED1Q8TER0 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 AP000766.1-201ENST00000561746 4140 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 API5P1-201ENST00000424316 1510 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 AC006511.2-201ENST00000388966 660 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 VN1R3-201ENST00000418822 919 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 LSM3P3-201ENST00000436601 306 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 AC234771.3-201ENST00000454984 622 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 AC010878.1-201ENST00000456500 1047 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 PSMA6P2-201ENST00000457574 686 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 AP005202.1-201ENST00000489915 867 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 RNA5SP278-201ENST00000517055 102 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 AC011921.2-201ENST00000589465 152 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 AC104184.1-201ENST00000607513 721 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SNED1Q8TER0 ARHGAP42P2-201ENST00000416089 2140 ntBASIC8.53□□□□□ -1.04
SNED1Q8TER0 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.53□□□□□ -1.04
SNED1Q8TER0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SNED1Q8TER0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
SNED1Q8TER0 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
SNED1Q8TER0 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 SNORA70G-201ENST00000383923 142 ntBASIC8.52□□□□□ -1.05
SNED1Q8TER0 RNA5SP122-201ENST00000384457 108 ntBASIC8.52□□□□□ -1.05
SNED1Q8TER0 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 HMGN1P2-201ENST00000445197 310 ntBASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 RN7SL654P-201ENST00000479178 292 ntBASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.52□□□□□ -1.05
SNED1Q8TER0 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
SNED1Q8TER0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 LINC01613-201ENST00000561476 2780 ntBASIC8.51□□□□□ -1.05
SNED1Q8TER0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
SNED1Q8TER0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SNED1Q8TER0 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms