Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX4O60224 NATP-201ENST00000523491 878 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX4O60224 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX4O60224 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 MIR4437-201ENST00000581331 60 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AC090415.1-201ENST00000581877 847 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AL035417.2-201ENST00000603887 796 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AL353807.4-201ENST00000604995 257 ntBASIC6.6□□□□□ -1.35
SSX4O60224 RNVU1-19-201ENST00000613023 167 ntBASIC6.6□□□□□ -1.35
SSX4O60224 AL354950.1-201ENST00000614150 568 ntBASIC6.6□□□□□ -1.35
SSX4O60224 PART1_3.1-201ENST00000619680 131 ntBASIC6.6□□□□□ -1.35
SSX4O60224 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX4O60224 SMG1P1-202ENST00000309865 4223 ntBASIC6.6□□□□□ -1.35
SSX4O60224 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 OR52B5P-204ENST00000641744 3467 ntBASIC6.6□□□□□ -1.35
SSX4O60224 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX4O60224 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX4O60224 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 ZNF887P-201ENST00000431363 1407 ntBASIC6.59□□□□□ -1.35
SSX4O60224 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SSX4O60224 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 AC132219.2-201ENST00000624416 2327 ntBASIC6.59□□□□□ -1.35
SSX4O60224 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 AC104083.1-201ENST00000569449 2615 ntBASIC6.59□□□□□ -1.35
SSX4O60224 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 RPL10P16-201ENST00000325000 645 ntBASIC6.59□□□□□ -1.35
SSX4O60224 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC6.59□□□□□ -1.35
SSX4O60224 AL117344.1-201ENST00000407196 616 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 AC127537.1-201ENST00000418183 748 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC092646.1-201ENST00000427142 901 ntBASIC6.59□□□□□ -1.35
SSX4O60224 OR6C71P-201ENST00000432580 913 ntBASIC6.59□□□□□ -1.35
SSX4O60224 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX4O60224 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX4O60224 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.59□□□□□ -1.35
SSX4O60224 RPL5P11-201ENST00000498068 893 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC023818.1-201ENST00000498379 384 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.59□□□□□ -1.35
SSX4O60224 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX4O60224 CHCHD3P2-201ENST00000550751 639 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX4O60224 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX4O60224 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.59□□□□□ -1.35
SSX4O60224 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 SLC20A1P2-201ENST00000618036 966 ntBASIC6.59□□□□□ -1.35
SSX4O60224 BX005040.2-201ENST00000620504 370 ntBASIC6.59□□□□□ -1.35
SSX4O60224 AC012557.3-201ENST00000626439 255 ntBASIC6.59□□□□□ -1.35
SSX4O60224 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.59□□□□□ -1.35
SSX4O60224 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX4O60224 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX4O60224 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SSX4O60224 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
SSX4O60224 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SSX4O60224 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SSX4O60224 PWRN1-212ENST00000569908 1435 ntBASIC6.59□□□□□ -1.36
SSX4O60224 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.59□□□□□ -1.36
SSX4O60224 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 AC012213.2-201ENST00000562917 4597 ntBASIC6.58□□□□□ -1.36
SSX4O60224 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSX4O60224 TRAF6P1-201ENST00000429404 1558 ntBASIC6.58□□□□□ -1.36
SSX4O60224 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX4O60224 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms